| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_0928 |
|---|
| Symbol | |
|---|
| ID | 3724147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | - |
|---|
| Start bp | 1095877 |
|---|
| End bp | 1096563 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637750519 |
|---|
| Product | ABC-type transport system, permease subunit |
|---|
| Protein accession | YP_356351 |
|---|
| Protein GI | 77918536 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 65 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACTTTT TGTTCGATTC CCTTAAAACC GCACTGGCGT TGATCTTTTC ATTCAACCCG
GAAGTCTACA TCACGGTCTG GACCTCCCTG TACGTTTCGA CCATCGCCAT CGTCTTCGCC
ACCATTGCCG GCGTGCCGGC GGGAGTTGCC ATCGGCCTGG GGCGCTTTCC GGGACGCCGC
ATCGTGATCA CATTGCTCAA CACCCTCATG GCCCTGCCCA CGGTGGTGGT CGGCCTGGTG
GTGTACGCAT TTTTGAGCCG CATGGGGCCA TTGGGGCGAT TCGGCCTGCT GTTCACGCCT
ACCGCCATGA TCATCGGCCA GATCATCCTG GCCACACCGA TCATCGCCAA CTATACCCTC
GGCGCCCTGA GCGCCTCGGA CAGCCGCATC ATGCCGACCG CCCTGACCCT TGGCGCCAGC
ACCACCCGCG GCACCATGGT CCTGCTGCAG GAGATCCGTT TCGGGGTCGT CGCCGCCATC
ATTGCCGGTT TCGGACGGAT TATCGCCGAA GTCGGCGTCG CCATGATGCT CGGCGGCAAC
ATCCGCGGTG TCACCCGCAC CATGACCACC GCCATCGCCC TGGAAACCAG CAAAGGGGAG
TTCGCCTTCG GCCTGGCCCT CGGCATCTTC CTGCTGTCGG TTGCGTTGCT GATCAACATG
TTTTTGAACT TCTTGCAACA GAGGTAA
|
|---|
| Protein sequence | MDFLFDSLKT ALALIFSFNP EVYITVWTSL YVSTIAIVFA TIAGVPAGVA IGLGRFPGRR
IVITLLNTLM ALPTVVVGLV VYAFLSRMGP LGRFGLLFTP TAMIIGQIIL ATPIIANYTL
GALSASDSRI MPTALTLGAS TTRGTMVLLQ EIRFGVVAAI IAGFGRIIAE VGVAMMLGGN
IRGVTRTMTT AIALETSKGE FAFGLALGIF LLSVALLINM FLNFLQQR
|
|---|
| |