| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4095 |
|---|
| Symbol | |
|---|
| ID | 5664479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 4979746 |
|---|
| End bp | 4980453 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641238759 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001503940 |
|---|
| Protein GI | 157963906 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAG GCTGGTTAGC CCTTATACAG CAGGCATTAA GCCTGCTGTT TTCATTGGAC
CCCGAAGTGT GGTCCATTAT CTCTGTCTCT TTTGCAGTAT CATTTGCGGC ACTAGCTATC
ACGCTGTTGC CTTCAATGGT ACTGGGCTTT CTCTTGGCCT TTACACGCTT TCCGGGCCGA
TGGTTAGTCA CCAATCTTAT CCAAACCCTA CAGTCCATTC CTACGGTTGT AATCGGTCTA
TTGGTCTATC TACTGCTGAC CAGAATGGGG CCGTTAGGGG ATTTAAAGTG GCTGTTTACC
CAAAAAGGTA TGATTCTCGG GCAGATGATG ATCTGTGCCC CGGTACTTGT CGCCATGAGC
CAAGCCGCCT TTACCAGTGT CGACCGCAGG GCATGGGAAA CCTCCCGTAC CTTAGGTGCA
CCAGCACTGA GTGCGATATG GGCGGTCTGC AGAGAGCTTA AAGTTCCACT ATTATTAGCT
ATTATCGCCG CATTTAGCCG CATTTTAACC GAGATAGGTT GTTCGATGAT GGTGGGCGGC
AACATAGCAG GAGTGACACG CAACATTCCT ACCGCTATCG CACTCGAAAC CAGTAAGGGT
GACTTTGCCC AAGCGATTGC ACTCGGGCTT GTATTACTCG TTTTAGCACT GATTTTAAAT
TTTGCTCTGG GTACATTAAG AGGCAAAGCC GAGCCGAGGA GTCATTAA
|
|---|
| Protein sequence | MNEGWLALIQ QALSLLFSLD PEVWSIISVS FAVSFAALAI TLLPSMVLGF LLAFTRFPGR
WLVTNLIQTL QSIPTVVIGL LVYLLLTRMG PLGDLKWLFT QKGMILGQMM ICAPVLVAMS
QAAFTSVDRR AWETSRTLGA PALSAIWAVC RELKVPLLLA IIAAFSRILT EIGCSMMVGG
NIAGVTRNIP TAIALETSKG DFAQAIALGL VLLVLALILN FALGTLRGKA EPRSH
|
|---|
| |