Gene SO_4720 details

Gene Information

• Locus tag: SO_4720
• ID: 1172299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4925012
• End bp: 4925719
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637346424
• Product: ABC transporter, permease protein
• Protein accession: NP_720236
• Protein GI: 24376192
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG4662] ABC-type tungstate transport system, periplasmic component

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAAG GCTGGCTAGC ACTGTTACAG CAGGCGTTAA GCCTGCTGTT TTCATTGGAC 
CCCGACGTTT GGTCCATCAT TTCTGTCTCG TTTTCGGTTT CGTTTGCGGC ACTTCTCATC 
ACCTTAGTCC CTTCGATGGT GTTAGGTTTT GTGTTGGCGT TTGCCCATTT TCCCGGCAAG 
TGGTTTGTCA CTAACTTAGT GCAGACACTG CAATCGATCC CTACGGTTGT TATCGGCCTG 
CTGGTATATC TCATTTTGAC CCGTAATGGC CCACTTGGGG ATTTAAAGTG GTTGTTTACT 
CAAGAAGGGA TGATCCTCGG CCAAATGCTG ATTTGTGCCC CCGTGATGAT CGCCATGAGC 
CAAGCGGCAT TTACCAGTGT CGATCGCAGA GCCTGGGAAA CTTCACGCAC CTTAGGCGCC 
TCATGGGCTG GCGCGGTTTG GGCTGTTTGT CGCGAACTAC GTATGCCATT ATTACTGGCG 
ATTGTGGCGG CCTTTAGCCG TATTCTCACT GAAGTTGGTT GTTCGATGAT GGTTGGCGGC 
AACATTTTAA ATGTGACCCG CAATATTCCT ACCGCTATCG CACTGGAGAC CAGCAAAGGT 
GATTTCGCCC AAGCTATCGC CCTCGGATTA GTGCTGCTAA TCTTGGCCTT GATCCTCAAC 
TTTGCCTTAG GTAGTTTACG CGGCAAAGAA ACGCCAAGGA GCCATTAA 

 

Protein sequence

MSEGWLALLQ QALSLLFSLD PDVWSIISVS FSVSFAALLI TLVPSMVLGF VLAFAHFPGK 
WFVTNLVQTL QSIPTVVIGL LVYLILTRNG PLGDLKWLFT QEGMILGQML ICAPVMIAMS 
QAAFTSVDRR AWETSRTLGA SWAGAVWAVC RELRMPLLLA IVAAFSRILT EVGCSMMVGG 
NILNVTRNIP TAIALETSKG DFAQAIALGL VLLILALILN FALGSLRGKE TPRSH