| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0123 |
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| Symbol | |
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| ID | 5612445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 136595 |
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| End bp | 137302 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640930949 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001471864 |
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| Protein GI | 157373264 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAG GCTGGTTAGC CCTTTTACAG CAGGCCTTAG GCCTGCTGTT TTCATTGGAC
CCTGATGTGT GGTCCATTGT ATCTGTATCT TTTTCTGTAT CTTTTGCGGC TCTGGGGATC
ACCCTGCTAC CTTCGATGAT ATTGGGATTT ATGCTGGCTT TTGGGCGCTT TCCCGGTCGC
TGGTTTGTCA CCAATTTAAT TCAGACTCTC CAGTCAATTC CTACCGTCGT CATTGGCCTG
CTCGTCTACC TTATGCTGAC CCGCATGGGC CCTCTGGGTG ATCTTAGATG GCTATTTACT
CAAAAAGGCA TGATTTTAGG CCAGATGATG ATCTGCGCTC CCGTGTTAGT CGCAATGAGT
CAAGCGGCCT TTACCAGCGT CGACCGTAGA GCCTGGGAAA CATCACGCAC CCTTGGCGCC
TCTTGGTTCA GGGGCATCTT GACGGTCTGT AGAGAGCTTA AAGTCCCGTT ACTCATGGCG
ATCGTGGCTG GGTTTAGCCG CATCTTGACT GAAGTGGGTT GCTCCATGAT GGTCGGTGGA
AATATTGCGG ATGTTACCCG AAACATCCCT ACCGCTATTG CACTCGAGAC CAGTAAAGGC
GACTTTGCCC AGGCAATAGC CCTAGGTCTT GTTCTGCTCA TCTTATCTCT CGTTCTTAAC
TTTACTTTAG GGGCGCTCAG AGGCAAAGCA GAGCCGAGGA GCCATTAG
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| Protein sequence | MNEGWLALLQ QALGLLFSLD PDVWSIVSVS FSVSFAALGI TLLPSMILGF MLAFGRFPGR
WFVTNLIQTL QSIPTVVIGL LVYLMLTRMG PLGDLRWLFT QKGMILGQMM ICAPVLVAMS
QAAFTSVDRR AWETSRTLGA SWFRGILTVC RELKVPLLMA IVAGFSRILT EVGCSMMVGG
NIADVTRNIP TAIALETSKG DFAQAIALGL VLLILSLVLN FTLGALRGKA EPRSH
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