Gene Shewana3_4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4078 
Symbol 
ID4480292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4901233 
End bp4901940 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content53% 
IMG OID639728693 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_871701 
Protein GI117922509 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG GCTGGTTAGC ACTGTTACAG CAGGCGTTAA GCCTGCTGTT TTCATTGGAC 
CCCGACGTTT GGTCCATCAT CTCTGTCTCG TTTTCGGTAT CCTTCGCGGC GCTGCTCATC
ACCTTAGTCC CCTCTATGGT GCTCGGTTTT GTGTTGGCGT TTGCCCATTT CCCCGGAAAG
TGGTTTGTCA CTAACTTAGT ACAAACGCTG CAATCGATCC CCACGGTCGT CATCGGCCTG
TTGGTGTATC TCATCTTGAC CCGCAACGGC CCGCTTGGGG ATTTAAGGTG GTTGTTCACT
CAAGAGGGGA TGATCCTCGG CCAAATGATG ATTTGCGCCC CCGTGATGAT AGCCATGAGT
CAAGCGGCCT TCACTAGTGT CGATCGCCGT GCATGGGAAA CCTCACGCAC CCTAGGCGCC
TCTTGGTTTA GCGCGGTCTG GACCGTGTGC CGCGAACTGC GTATGCCGTT ATTACTGGCA
ATTGTCGCAG CCTTTAGCCG TATTCTCACC GAAGTCGGCT GTTCTATGAT GGTCGGCGGC
AACATTTTAA ACGTAACACG TAATATCCCG ACGGCTATCG CACTGGAAAC CAGTAAAGGT
GATTTCGCCC AAGCTATCGC CCTCGGATTA GTGCTGCTAA TCTTGGCCTT GATCCTCAAC
TTTGCCTTAG GTAGTTTACG CGGCAAAGAA ACGCCAAGGA GCCATTAA
 
Protein sequence
MSEGWLALLQ QALSLLFSLD PDVWSIISVS FSVSFAALLI TLVPSMVLGF VLAFAHFPGK 
WFVTNLVQTL QSIPTVVIGL LVYLILTRNG PLGDLRWLFT QEGMILGQMM ICAPVMIAMS
QAAFTSVDRR AWETSRTLGA SWFSAVWTVC RELRMPLLLA IVAAFSRILT EVGCSMMVGG
NILNVTRNIP TAIALETSKG DFAQAIALGL VLLILALILN FALGSLRGKE TPRSH