Gene TM1040_3765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3765 
Symbol 
ID4075473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp820294 
End bp821019 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID638005286 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_611994 
Protein GI99078736 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGG CGGAAATTTT GCAAAGCATG GGAGAAGCCA TATCGCTGGC ATTGGCGCTG 
GTGATGTCCG GAGACGCCGA TCTGTTTGAG ATCGTCGGCC TGTCCTTGCG CGTCAGCCTG
AGCGCAACCG TCTTTGCGTG CCTCATTGGG TTGCCGATCG GCGCATTGGT CGCGATCAGC
CGCTTCCCGG GGCGGGGCGC CTGCCTGGTG CTGATGAATG CGCTGATGGG TCTGCCGCCT
GTTGTGGTCG GGCTCTTGGT CTATCTGCAT CTGTCGCGTT CGGGGCCGCT TGGGTTTCTT
GGCCTCCTTT ATACGCCCAC CGCCATGATC ATCGCACAGA CGATCCTAAT TGCGCCTATT
GTCGCTGCGC TGTCGCGGCA GGTGATTGAG GACCTCCACG CGGAATATGC GGAGCAATTT
CGCTCGCTCT GTCTCAGCCG CGCGCAAGCG GTGGCCGCGC TCCTCTGGGA TGCGCGCTAT
TCGCTGCTGA CGGTTGGTCT CGCCGGGTTC GGAAGGGCCG TTGCAGAGGT CGGCGCGGTG
ATCATCGTCG GCGGGAACAT CGACCACCTG ACCCGTGTCA TGACCACCGC CATCGCGCTT
GAAACCTCCA AGGGTGATCT CGCCCTCGCA CTGGCGCTGG GAGTGGTTCT TCTGGTGATC
GCGCTGGGTG TAAACGCTGC CGTGCAAGGT CTGCGCATGA GCGCCCGGAG ACAAGCCTAT
GTCTAG
 
Protein sequence
MQKAEILQSM GEAISLALAL VMSGDADLFE IVGLSLRVSL SATVFACLIG LPIGALVAIS 
RFPGRGACLV LMNALMGLPP VVVGLLVYLH LSRSGPLGFL GLLYTPTAMI IAQTILIAPI
VAALSRQVIE DLHAEYAEQF RSLCLSRAQA VAALLWDARY SLLTVGLAGF GRAVAEVGAV
IIVGGNIDHL TRVMTTAIAL ETSKGDLALA LALGVVLLVI ALGVNAAVQG LRMSARRQAY
V