Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3765 |
Symbol | |
ID | 4075473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 820294 |
End bp | 821019 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638005286 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_611994 |
Protein GI | 99078736 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGG CGGAAATTTT GCAAAGCATG GGAGAAGCCA TATCGCTGGC ATTGGCGCTG GTGATGTCCG GAGACGCCGA TCTGTTTGAG ATCGTCGGCC TGTCCTTGCG CGTCAGCCTG AGCGCAACCG TCTTTGCGTG CCTCATTGGG TTGCCGATCG GCGCATTGGT CGCGATCAGC CGCTTCCCGG GGCGGGGCGC CTGCCTGGTG CTGATGAATG CGCTGATGGG TCTGCCGCCT GTTGTGGTCG GGCTCTTGGT CTATCTGCAT CTGTCGCGTT CGGGGCCGCT TGGGTTTCTT GGCCTCCTTT ATACGCCCAC CGCCATGATC ATCGCACAGA CGATCCTAAT TGCGCCTATT GTCGCTGCGC TGTCGCGGCA GGTGATTGAG GACCTCCACG CGGAATATGC GGAGCAATTT CGCTCGCTCT GTCTCAGCCG CGCGCAAGCG GTGGCCGCGC TCCTCTGGGA TGCGCGCTAT TCGCTGCTGA CGGTTGGTCT CGCCGGGTTC GGAAGGGCCG TTGCAGAGGT CGGCGCGGTG ATCATCGTCG GCGGGAACAT CGACCACCTG ACCCGTGTCA TGACCACCGC CATCGCGCTT GAAACCTCCA AGGGTGATCT CGCCCTCGCA CTGGCGCTGG GAGTGGTTCT TCTGGTGATC GCGCTGGGTG TAAACGCTGC CGTGCAAGGT CTGCGCATGA GCGCCCGGAG ACAAGCCTAT GTCTAG
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Protein sequence | MQKAEILQSM GEAISLALAL VMSGDADLFE IVGLSLRVSL SATVFACLIG LPIGALVAIS RFPGRGACLV LMNALMGLPP VVVGLLVYLH LSRSGPLGFL GLLYTPTAMI IAQTILIAPI VAALSRQVIE DLHAEYAEQF RSLCLSRAQA VAALLWDARY SLLTVGLAGF GRAVAEVGAV IIVGGNIDHL TRVMTTAIAL ETSKGDLALA LALGVVLLVI ALGVNAAVQG LRMSARRQAY V
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