Gene Pnec_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_0569 
Symbol 
ID6183166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp501192 
End bp501611 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content46% 
IMG OID641671244 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001797440 
Protein GI171463327 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAG CTTTTCAAGA TGCCCTTTCT CTGCTTGGAG GGGTTTTGGG AATCGTCTTA 
GTGTCCCTGC AAGTTAGCTT GAGCACCCTT TTTATTGGAA CGCTATTGGG TCTCCCCATT
GGGGCCCTCT TAGCAACAGA GCAATTTACT GGTAAAAAAT CGATTATTGT GACCCTCAAT
ACTCTGATGG GCGTTCCAAC GGTAATCGTG GGTGTTCTTG TTTACTTAAT GCTATCTCGC
TCAGGGCCCT TGGGGGCATG GGGATGGTTA TTTACACCCA AAGGCATAAT CGTAGCCCAA
ACCCTGCTTA CAACCCCTCT AATAGCCGCC CTTAGCAGGC AAATTTTGGA AGACTTCTGG
AAAATCCATC GCGATTCTTT TTTGAGCCTC AGATTACCAC CTCTATCTCG TTTTAAGTAG
 
Protein sequence
MLKAFQDALS LLGGVLGIVL VSLQVSLSTL FIGTLLGLPI GALLATEQFT GKKSIIVTLN 
TLMGVPTVIV GVLVYLMLSR SGPLGAWGWL FTPKGIIVAQ TLLTTPLIAA LSRQILEDFW
KIHRDSFLSL RLPPLSRFK