Gene Rpic12D_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2460 
Symbol 
ID8020124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2575877 
End bp2576584 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID644831241 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002982404 
Protein GI241664044 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.455343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.828531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCT GGTCGGCCAC CGTCGACGCC TTCGCCCTGC TTGCCAGCGG CGATGCGGCG 
TTGTGGCGGA TCGTCTGGGT GTCGTTGAAG GTGGCGATCG CGGGGCTGCT GCTGGCGGCG
CCCCCCGGTC TGCTCATCGC TTACCTCATC GCCATGCACG GGTTTGCAGG GCGCCGTGCG
CTGGTGGTGC TGGCGCAGGC ATCGCTGTCG TTTCCGACCG TGCTGATCGG GTTGCTGCTG
TATCTGCTGC TTTCGCGCCA GGGCCCGCTG GGCGGCTTCG GGCTGCTGTT CACCCAAGGC
GGCATGATCC TCGGACAAGC GGTGCTTGGG CTGCCGGTGA TCGTCGCGTT TGCGCTCACC
ACACTCGAGC GCGCGGATCC GCGTCTCGCA GAAACCGCTC GTGTGCTGGG CGCCGGGCGC
GTCCGTTTGC TGTTGACGGT GTTTCGTGAA TTGCGCTTCG GCCTCATGGC TGCAGTGGTG
GCCGGCTTCG GGCGCGTCAT CGCCGAAGTG GGCTCGGCGC TGATGGTCGG CGGCAACATC
GAGGGCGTCA CGCGCACCAT GACCACGGCG ATTGCGCTGG AAACCAGCAA GGGCGAGTTC
GCACAGGGCA TCGCGCTGGG CATCGTGCTG ATCGTGCTGG CACTGCTCGT CAACCTTGTG
CTGGCGTGGC TGCAAGGGGC TGGCAACTAT CGCAGGGAGC CGGCATGA
 
Protein sequence
MEIWSATVDA FALLASGDAA LWRIVWVSLK VAIAGLLLAA PPGLLIAYLI AMHGFAGRRA 
LVVLAQASLS FPTVLIGLLL YLLLSRQGPL GGFGLLFTQG GMILGQAVLG LPVIVAFALT
TLERADPRLA ETARVLGAGR VRLLLTVFRE LRFGLMAAVV AGFGRVIAEV GSALMVGGNI
EGVTRTMTTA IALETSKGEF AQGIALGIVL IVLALLVNLV LAWLQGAGNY RREPA