| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0891 |
|---|
| Symbol | |
|---|
| ID | 4572074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 938669 |
|---|
| End bp | 939367 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639754933 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_900578 |
|---|
| Protein GI | 118579328 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4662] ABC-type tungstate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.819313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTTT TTTTAGAAGG ACTCATCAAA GCCTGGCAAC TGCTCACAAG CCTCGACTCC
GAGGTCCTGT CGGTTACCCT GCTCTCCCTG AAGGTCTCTG GCCTCGCAAC ACTGTTCAGC
CTGTTGATCG GACTCGGCGG TGGAACCGTG GTTGCGTTGA CCGATTTTCC CGGCAAACGT
ATTCTGGTGA GCGTGGTCAA TACCGGCATG GGGCTCCCGC CGGTGGTTGT CGGTCTTTTT
GTTACGATAC TGATCTGGCG TAACGGCCCT CTCGGTTATC TGGAACTGCT CTACACCCCC
GGCGCAATCA TCATCGCGCA AACCATCATC GCCACACCCA TTGTCATGGG TATCTCCATC
GCCTCCATAC AGAACCTGCC CGCCAATCTC CGTTTGCAGA TCCTGGCTCT GGGCGCTTCG
CGGCTTCAGA TGACCTGGCT CCTGGTGAAA GAGGCCAAGC TGCCGCTTCT GGCGGCGGTT
ATGGCCGGGT TTGGCGGTGT CATCTCCGAG GTGGGCGCTT CGATCATGGT GGGGGGCAAC
ATCAAGGGAT ATACGCGCGT CCTGACCACG GCGACGGTTA TGGAGACCAG TCGCGGCAAT
TTTGACGTTG CCATCGCGCT CAGTATCATT CTGCTCGGCC TCTGTTTTGG TATCAACTAC
GTGCTGACCG CCGTTCAGCA GAGGCAGCGT CCGCGATGA
|
|---|
| Protein sequence | MELFLEGLIK AWQLLTSLDS EVLSVTLLSL KVSGLATLFS LLIGLGGGTV VALTDFPGKR
ILVSVVNTGM GLPPVVVGLF VTILIWRNGP LGYLELLYTP GAIIIAQTII ATPIVMGISI
ASIQNLPANL RLQILALGAS RLQMTWLLVK EAKLPLLAAV MAGFGGVISE VGASIMVGGN
IKGYTRVLTT ATVMETSRGN FDVAIALSII LLGLCFGINY VLTAVQQRQR PR
|
|---|
| |