Gene Dret_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2397 
Symbol 
ID8420257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2742278 
End bp2742973 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content59% 
IMG OID645038998 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003199257 
Protein GI258406515 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTTT TTCTCGACAG TTTGCGCTCG GCCTTTTTGC TCATTCGGGA GATGGACCCC 
GAATTGCTGA CTATTGTCGG CGTCTCCTTG AAGGTCAGCA TGAGTTCTAC CGCCTTGGCG
GCACTGTTCG GGATCCCGGT CGGGTTTGCA GTAGCCATGG CCCGTTTTCC GGGGCGCCGG
GGCGTGATAA CCGTTTTCAA CACCCTCCTG GCTGTGCCCA CGGTGGTCAT CGGCCTTTTT
GTCTACACCT TCATTTCCCG CCGCGGCATT CTCGGCTCCC TCGATCTGCT CTACACCCAA
AAAGCGATCA TTATCGGGCA GACGTTGCTC GTCCTGCCGA TTGTGGCCAC ATTTACCATT
TCTGCTCTGA GCCGCATCGA TACGCGATAT CGCAAGGCCG CCCTGACCCT GGGAGCCAAT
ACCTGGCAGA CGGCCGTGTT GGTCCTGCGG GAAGCCCGCT ACGGGATCGG AGCTGCCGTG
GTCGCTGCCT TCGGTCGGGC GATCGCCGAA ATCGGCGTGG CCATGATGCT TGGCGGCAAT
GCCCGTGGCT TTACCAGGAC CATGACCACG GCCATGGCCC TGGAGTACGA TAAAGGGGAG
TTTGTCCTGG CCGTAGCCCT GGGCGTGGTC CTGCTCAGCA TCAGTCTGGC GGTGAATATC
ATCCTCAACC TTTGTCAGGG GCGGCTGGAG AAATAA
 
Protein sequence
MQFFLDSLRS AFLLIREMDP ELLTIVGVSL KVSMSSTALA ALFGIPVGFA VAMARFPGRR 
GVITVFNTLL AVPTVVIGLF VYTFISRRGI LGSLDLLYTQ KAIIIGQTLL VLPIVATFTI
SALSRIDTRY RKAALTLGAN TWQTAVLVLR EARYGIGAAV VAAFGRAIAE IGVAMMLGGN
ARGFTRTMTT AMALEYDKGE FVLAVALGVV LLSISLAVNI ILNLCQGRLE K