More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0028 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0028  binding-protein-dependent transport systems inner membrane component  100 
 
 
230 aa  437  9.999999999999999e-123  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000259316  normal  0.154621 
 
 
-
 
NC_012918  GM21_2527  binding-protein-dependent transport systems inner membrane component  59.57 
 
 
232 aa  258  6e-68  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00176301 
 
 
-
 
NC_011146  Gbem_1694  binding-protein-dependent transport systems inner membrane component  59.13 
 
 
232 aa  254  8e-67  Geobacter bemidjiensis Bem  Bacteria  normal  0.754071  n/a   
 
 
-
 
NC_007644  Moth_0068  binding-protein dependent transport system inner membrane protein  60.43 
 
 
245 aa  249  3e-65  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0463742  normal  0.217149 
 
 
-
 
NC_009253  Dred_2270  binding-protein-dependent transport systems inner membrane component  62.17 
 
 
232 aa  243  9.999999999999999e-64  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3543  binding-protein-dependent transport systems inner membrane component  61.3 
 
 
232 aa  243  1.9999999999999999e-63  Geobacter uraniireducens Rf4  Bacteria  normal  0.0152138  n/a   
 
 
-
 
NC_008609  Ppro_0891  binding-protein-dependent transport systems inner membrane component  58.7 
 
 
232 aa  233  2.0000000000000002e-60  Pelobacter propionicus DSM 2379  Bacteria  normal  0.819313  n/a   
 
 
-
 
NC_007413  Ava_4039  binding-protein dependent transport system inner membrane protein  58.52 
 
 
250 aa  225  4e-58  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.564931 
 
 
-
 
NC_010718  Nther_0328  binding-protein-dependent transport systems inner membrane component  49.12 
 
 
234 aa  207  2e-52  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00042229  normal  0.158089 
 
 
-
 
NC_009051  Memar_1878  binding-protein-dependent transport systems inner membrane component  46.26 
 
 
231 aa  191  1e-47  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_1893  binding-protein-dependent transport systems inner membrane component  46.78 
 
 
233 aa  190  2e-47  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010320  Teth514_1387  binding-protein-dependent transport systems inner membrane component  49.56 
 
 
232 aa  187  2e-46  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0928  ABC-type transport system, permease subunit  43.86 
 
 
228 aa  183  2.0000000000000003e-45  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0520  binding-protein-dependent transport systems inner membrane component  44.12 
 
 
228 aa  178  4.999999999999999e-44  Methanospirillum hungatei JF-1  Archaea  normal  0.40002  normal  0.449442 
 
 
-
 
NC_008942  Mlab_0466  hypothetical protein  40.26 
 
 
235 aa  177  1e-43  Methanocorpusculum labreanum Z  Archaea  normal  0.700584  normal 
 
 
-
 
NC_011832  Mpal_2303  binding-protein-dependent transport systems inner membrane component  41.92 
 
 
231 aa  177  1e-43  Methanosphaerula palustris E1-9c  Archaea  normal  0.105994  normal  0.374369 
 
 
-
 
NC_008553  Mthe_1203  binding-protein-dependent transport systems inner membrane component  40.27 
 
 
228 aa  177  2e-43  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_010725  Mpop_2968  binding-protein-dependent transport systems inner membrane component  44.44 
 
 
231 aa  175  5e-43  Methylobacterium populi BJ001  Bacteria  normal  0.946732  normal 
 
 
-
 
NC_008043  TM1040_3765  binding-protein-dependent transport systems inner membrane component  45.22 
 
 
241 aa  175  7e-43  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3076  binding-protein-dependent transport systems inner membrane component  45.24 
 
 
231 aa  171  6.999999999999999e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0752148  normal 
 
 
-
 
NC_010172  Mext_2850  binding-protein-dependent transport systems inner membrane component  45.24 
 
 
246 aa  171  9e-42  Methylobacterium extorquens PA1  Bacteria  normal  0.402937  normal 
 
 
-
 
NC_007517  Gmet_1040  binding-protein dependent transport system inner membrane protein  45.61 
 
 
228 aa  169  4e-41  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000111264  hitchhiker  0.0000000335509 
 
 
-
 
NC_008340  Mlg_2740  binding-protein-dependent transport systems inner membrane component  49.47 
 
 
232 aa  168  8e-41  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.726638 
 
 
-
 
NC_010510  Mrad2831_6167  binding-protein-dependent transport systems inner membrane component  47.37 
 
 
230 aa  165  5e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.931122 
 
 
-
 
NC_013165  Shel_27150  ABC-type tungstate transport system, periplasmic component  43.36 
 
 
248 aa  165  6.9999999999999995e-40  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.544705  normal 
 
 
-
 
NC_013223  Dret_2397  binding-protein-dependent transport systems inner membrane component  41.86 
 
 
231 aa  164  9e-40  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0626  basic organic compound ABC-transporter  46.35 
 
 
228 aa  163  3e-39  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU2701  ABC transporter, permease protein  44.3 
 
 
228 aa  161  8.000000000000001e-39  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_3403  binding-protein-dependent transport systems inner membrane component  39.91 
 
 
229 aa  161  1e-38  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.669819  n/a   
 
 
-
 
NC_008254  Meso_2437  binding-protein-dependent transport systems inner membrane component  44.9 
 
 
230 aa  159  4e-38  Chelativorans sp. BNC1  Bacteria  normal  0.829623  n/a   
 
 
-
 
NC_010718  Nther_2285  binding-protein-dependent transport systems inner membrane component  46 
 
 
229 aa  157  2e-37  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.000107267  normal 
 
 
-
 
NC_008751  Dvul_2224  binding-protein-dependent transport systems inner membrane component  37.83 
 
 
231 aa  152  2.9999999999999998e-36  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal 
 
 
-
 
NC_010424  Daud_1541  binding-protein-dependent transport systems inner membrane component  45.28 
 
 
217 aa  152  4e-36  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0915654  n/a   
 
 
-
 
NC_007908  Rfer_2869  binding-protein-dependent transport systems inner membrane component  47.31 
 
 
260 aa  152  4e-36  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_3942  binding-protein-dependent transport systems inner membrane component  43.54 
 
 
231 aa  150  1e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0272486 
 
 
-
 
NC_009783  VIBHAR_02263  hypothetical protein  37.99 
 
 
232 aa  150  2e-35  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011883  Ddes_1777  binding-protein-dependent transport systems inner membrane component  37.83 
 
 
231 aa  149  4e-35  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.753761  n/a   
 
 
-
 
NC_009621  Smed_5503  binding-protein-dependent transport systems inner membrane component  43.68 
 
 
241 aa  148  6e-35  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1131  ABC transporter, permease protein  38.84 
 
 
232 aa  148  6e-35  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_3625  binding-protein-dependent transport systems inner membrane component  42.13 
 
 
231 aa  148  8e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1722  binding-protein-dependent transport systems inner membrane component  43.28 
 
 
239 aa  147  2.0000000000000003e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003505  ABC-type tungstate transport system permease protein  37.99 
 
 
232 aa  146  3e-34  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1758  binding-protein-dependent transport systems inner membrane component  46 
 
 
257 aa  146  3e-34  Polaromonas sp. JS666  Bacteria  normal  normal  0.175288 
 
 
-
 
NC_008782  Ajs_3129  binding-protein-dependent transport systems inner membrane component  40.8 
 
 
245 aa  146  3e-34  Acidovorax sp. JS42  Bacteria  normal  normal  0.682243 
 
 
-
 
NC_008346  Swol_1632  sulfate/tungstate ABC transporter permease  44.26 
 
 
225 aa  146  3e-34  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0233  ABC transporter, permease protein  36.4 
 
 
232 aa  145  6e-34  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2476  binding-protein-dependent transport systems inner membrane component  40.91 
 
 
242 aa  144  1e-33  Acidovorax ebreus TPSY  Bacteria  normal  0.8915  n/a   
 
 
-
 
NC_009379  Pnuc_1392  binding-protein-dependent transport systems inner membrane component  39.71 
 
 
231 aa  142  5e-33  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2806  binding-protein-dependent transport systems inner membrane component  41.28 
 
 
234 aa  141  9.999999999999999e-33  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_2918  binding-protein-dependent transport systems inner membrane component  40.71 
 
 
232 aa  140  1.9999999999999998e-32  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1588  binding-protein-dependent transport systems inner membrane component  45.59 
 
 
251 aa  138  7e-32  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1813  putative permease component of ABC transporter  39.74 
 
 
238 aa  136  2e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00043828 
 
 
-
 
NC_013743  Htur_2295  binding-protein-dependent transport systems inner membrane component  40.4 
 
 
238 aa  136  3.0000000000000003e-31  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013924  Nmag_3966  binding-protein-dependent transport systems inner membrane component  41.99 
 
 
238 aa  135  5e-31  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007963  Csal_2083  binding-protein-dependent transport systems inner membrane component  43.01 
 
 
235 aa  135  7.000000000000001e-31  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2781  binding-protein dependent transport system inner membrane protein  38.94 
 
 
232 aa  134  9.999999999999999e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.24732  n/a   
 
 
-
 
NC_009802  CCC13826_0203  ABC transporter, permease protein  30.43 
 
 
230 aa  134  9.999999999999999e-31  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4095  binding-protein-dependent transport systems inner membrane component  39.59 
 
 
235 aa  132  3e-30  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0123  ABC transporter, permease protein  37.78 
 
 
235 aa  132  3e-30  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.749352 
 
 
-
 
NC_009092  Shew_3684  binding-protein-dependent transport systems inner membrane component  40 
 
 
235 aa  132  5e-30  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_012030  Hlac_3453  binding-protein-dependent transport systems inner membrane component  40.8 
 
 
238 aa  132  6e-30  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_008781  Pnap_1509  binding-protein-dependent transport systems inner membrane component  45 
 
 
254 aa  131  7.999999999999999e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2630  binding-protein-dependent transport systems inner membrane component  37.72 
 
 
229 aa  130  1.0000000000000001e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012029  Hlac_2056  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
238 aa  128  6e-29  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.202188  normal  0.0740354 
 
 
-
 
NC_013522  Taci_1649  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
231 aa  128  9.000000000000001e-29  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0086  binding-protein-dependent transport systems inner membrane component  39.09 
 
 
235 aa  128  9.000000000000001e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008698  Tpen_1794  binding-protein-dependent transport systems inner membrane component  41.83 
 
 
218 aa  127  1.0000000000000001e-28  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_013517  Sterm_1681  binding-protein-dependent transport systems inner membrane component  35.27 
 
 
209 aa  127  2.0000000000000002e-28  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2781  binding-protein-dependent transport systems inner membrane component  39.41 
 
 
231 aa  126  3e-28  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008787  CJJ81176_1524  tungstate ABC transporter, permease protein, putative  32.41 
 
 
228 aa  126  3e-28  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1891  putative tungstate ABC transporter, permease protein  30.7 
 
 
228 aa  125  4.0000000000000003e-28  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3918  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
235 aa  125  4.0000000000000003e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0186248  n/a   
 
 
-
 
NC_003295  RSc2631  transmembrane ABC transporter protein  39.74 
 
 
235 aa  125  5e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0364359  normal  0.493142 
 
 
-
 
NC_003912  CJE1710  tungstate ABC transporter, permease protein, putative  30.7 
 
 
228 aa  125  6e-28  Campylobacter jejuni RM1221  Bacteria  normal  0.506083  n/a   
 
 
-
 
NC_009438  Sputcn32_3880  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
235 aa  124  1e-27  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_2866  binding-protein-dependent transport systems inner membrane component  39.7 
 
 
235 aa  123  2e-27  Ralstonia pickettii 12J  Bacteria  normal  0.370655  normal 
 
 
-
 
NC_009831  Ssed_0123  binding-protein-dependent transport systems inner membrane component  39.89 
 
 
235 aa  122  3e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0825  binding-protein-dependent transport systems inner membrane component  37.25 
 
 
210 aa  122  5e-27  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00592133  n/a   
 
 
-
 
NC_008321  Shewmr4_3875  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
235 aa  122  7e-27  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_4078  binding-protein-dependent transport systems inner membrane component  38.83 
 
 
235 aa  121  9.999999999999999e-27  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4720  ABC transporter, permease protein  38.83 
 
 
235 aa  120  1.9999999999999998e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012856  Rpic12D_2460  binding-protein-dependent transport systems inner membrane component  39.69 
 
 
235 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12D  Bacteria  normal  0.455343  normal  0.828531 
 
 
-
 
NC_008322  Shewmr7_3968  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
235 aa  120  1.9999999999999998e-26  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_4263  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
235 aa  119  3.9999999999999996e-26  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4458  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
235 aa  119  3.9999999999999996e-26  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4318  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
235 aa  119  3.9999999999999996e-26  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0081  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
235 aa  119  3.9999999999999996e-26  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0472  binding-protein-dependent transport systems inner membrane component  34.3 
 
 
234 aa  118  9.999999999999999e-26  Methanococcus aeolicus Nankai-3  Archaea  normal  0.183215  n/a   
 
 
-
 
NC_008825  Mpe_A2223  putative permease component of ABC transporter  47.06 
 
 
252 aa  112  5e-24  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009637  MmarC7_1208  molybdate ABC transporter, inner membrane subunit  32.32 
 
 
221 aa  92.8  4e-18  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009135  MmarC5_1454  molybdate ABC transporter, inner membrane subunit  31.82 
 
 
221 aa  87.8  1e-16  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009634  Mevan_1667  molybdate ABC transporter, inner membrane subunit  34.69 
 
 
221 aa  87  2e-16  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_008701  Pisl_0047  binding-protein-dependent transport systems inner membrane component  33.85 
 
 
214 aa  84.7  0.000000000000001  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_008346  Swol_1555  molybdenum ABC transporter, permease protein  29.86 
 
 
241 aa  82.4  0.000000000000006  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009634  Mevan_1618  NifC-like ABC-type porter  29.58 
 
 
266 aa  82  0.000000000000007  Methanococcus vannielii SB  Archaea  normal  0.156172  n/a   
 
 
-
 
NC_009975  MmarC6_0747  molybdate ABC transporter, inner membrane subunit  31.63 
 
 
221 aa  82  0.000000000000007  Methanococcus maripaludis C6  Archaea  normal  0.831399  n/a   
 
 
-
 
NC_010531  Pnec_0569  binding-protein-dependent transport systems inner membrane component  37.07 
 
 
139 aa  80.5  0.00000000000002  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_008787  CJJ81176_0323  molybdenum ABC transporter, permease protein  27.4 
 
 
222 aa  79.3  0.00000000000005  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0346  molybdenum ABC transporter, permease protein  26.94 
 
 
222 aa  79  0.00000000000006  Campylobacter jejuni RM1221  Bacteria  normal  0.290442  n/a   
 
 
-
 
NC_013501  Rmar_0055  molybdate ABC transporter, inner membrane subunit  30.14 
 
 
220 aa  78.6  0.00000000000008  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
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