Gene Daud_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1541 
Symbol 
ID6026408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1623558 
End bp1624211 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID641594365 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001717676 
Protein GI169831694 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4662] ABC-type tungstate transport system, periplasmic component 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0915654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGGCCC GCGACCCCAA GCTCATGCAG ATCATCTGGC TTTCACTCCA GGTGTCGGGA 
GTGGCCGTGA GTCTCGCCGC CCTGATGGGC ATTCCGCTCG GCACCTGGCT GGGTATGCAG
CCTGCCCGGC GCGTGCGCTT GCCCGCGCTT TTTCTCTACA CTTTCATGGG CCTGCCGCCG
GTCCTGGTCG GGCTCTTGGT TTACCTGTTG CTTTCCGCGC GGGGACCCTT CGGTGTTCTG
AGCCTGCTTT ACACCCCTAC GGCCATGATC ATCGCCCAGA CCATCCTGGC GCTGCCCATC
ATCGCTGGCC TGACCATGGT CGCCGTGCGC GCCAAAGACC GGGAAATCAG GGACACGGCC
GTCTCGCTCG GGGCGGGTGC CTGGCAGGTG GCGCTCACGG TCGTGCGGGA AGCGCGGGTG
GCGATCATCG GCGCGGTGGT GGCCGGCACC GGACGGGTGA TGGCCGAGGT GGGCGCGGTG
ATGATGGTCG GCGGGAATAT CGAGGGCAAG ACCCGAGTGA TGACCACCGC CATCGTGCTG
GAAACCAGGC GGGGTAACTT TGAAATAGCC ATCGGCCTGG GAATGGTGCT GCTGTTTCTG
GCCTTCATAA TCAACACGGC GCTCTACCGC CTGCAGGGGG TGCCCAGGAA TTGA
 
Protein sequence
MVARDPKLMQ IIWLSLQVSG VAVSLAALMG IPLGTWLGMQ PARRVRLPAL FLYTFMGLPP 
VLVGLLVYLL LSARGPFGVL SLLYTPTAMI IAQTILALPI IAGLTMVAVR AKDREIRDTA
VSLGAGAWQV ALTVVREARV AIIGAVVAGT GRVMAEVGAV MMVGGNIEGK TRVMTTAIVL
ETRRGNFEIA IGLGMVLLFL AFIINTALYR LQGVPRN