More than 300 homologs were found in PanDaTox collection
for query gene Mnod_3625 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011894  Mnod_3625  binding-protein-dependent transport systems inner membrane component  100 
 
 
231 aa  437  9.999999999999999e-123  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2968  binding-protein-dependent transport systems inner membrane component  76.62 
 
 
231 aa  338  2.9999999999999998e-92  Methylobacterium populi BJ001  Bacteria  normal  0.946732  normal 
 
 
-
 
NC_010511  M446_3942  binding-protein-dependent transport systems inner membrane component  85.71 
 
 
231 aa  334  5e-91  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0272486 
 
 
-
 
NC_011757  Mchl_3076  binding-protein-dependent transport systems inner membrane component  75.32 
 
 
231 aa  310  1e-83  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0752148  normal 
 
 
-
 
NC_010172  Mext_2850  binding-protein-dependent transport systems inner membrane component  74.46 
 
 
246 aa  306  2.0000000000000002e-82  Methylobacterium extorquens PA1  Bacteria  normal  0.402937  normal 
 
 
-
 
NC_010510  Mrad2831_6167  binding-protein-dependent transport systems inner membrane component  73.36 
 
 
230 aa  285  2.9999999999999996e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.931122 
 
 
-
 
NC_011662  Tmz1t_2806  binding-protein-dependent transport systems inner membrane component  52.63 
 
 
234 aa  219  1.9999999999999999e-56  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3765  binding-protein-dependent transport systems inner membrane component  57.89 
 
 
241 aa  218  5e-56  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1392  binding-protein-dependent transport systems inner membrane component  52.81 
 
 
231 aa  217  1e-55  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2740  binding-protein-dependent transport systems inner membrane component  58.88 
 
 
232 aa  210  2e-53  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.726638 
 
 
-
 
NC_009952  Dshi_0626  basic organic compound ABC-transporter  56.54 
 
 
228 aa  207  2e-52  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_2437  binding-protein-dependent transport systems inner membrane component  52.38 
 
 
230 aa  205  5e-52  Chelativorans sp. BNC1  Bacteria  normal  0.829623  n/a   
 
 
-
 
NC_009621  Smed_5503  binding-protein-dependent transport systems inner membrane component  54.31 
 
 
241 aa  202  5e-51  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3129  binding-protein-dependent transport systems inner membrane component  51.95 
 
 
245 aa  191  9e-48  Acidovorax sp. JS42  Bacteria  normal  normal  0.682243 
 
 
-
 
NC_011992  Dtpsy_2476  binding-protein-dependent transport systems inner membrane component  51.95 
 
 
242 aa  191  1e-47  Acidovorax ebreus TPSY  Bacteria  normal  0.8915  n/a   
 
 
-
 
NC_010524  Lcho_1813  putative permease component of ABC transporter  54.74 
 
 
238 aa  184  1.0000000000000001e-45  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00043828 
 
 
-
 
NC_008942  Mlab_0466  hypothetical protein  42.11 
 
 
235 aa  175  4e-43  Methanocorpusculum labreanum Z  Archaea  normal  0.700584  normal 
 
 
-
 
NC_007908  Rfer_2869  binding-protein-dependent transport systems inner membrane component  53.26 
 
 
260 aa  175  5e-43  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_1588  binding-protein-dependent transport systems inner membrane component  58.99 
 
 
251 aa  174  9.999999999999999e-43  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0928  ABC-type transport system, permease subunit  42.06 
 
 
228 aa  165  4e-40  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009051  Memar_1893  binding-protein-dependent transport systems inner membrane component  42.99 
 
 
233 aa  166  4e-40  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_013165  Shel_27150  ABC-type tungstate transport system, periplasmic component  42.03 
 
 
248 aa  161  7e-39  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.544705  normal 
 
 
-
 
NC_009051  Memar_1878  binding-protein-dependent transport systems inner membrane component  41.18 
 
 
231 aa  160  1e-38  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_008554  Sfum_0028  binding-protein-dependent transport systems inner membrane component  41.26 
 
 
230 aa  160  2e-38  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000259316  normal  0.154621 
 
 
-
 
NC_011146  Gbem_1694  binding-protein-dependent transport systems inner membrane component  43.93 
 
 
232 aa  159  3e-38  Geobacter bemidjiensis Bem  Bacteria  normal  0.754071  n/a   
 
 
-
 
NC_010718  Nther_0328  binding-protein-dependent transport systems inner membrane component  42.99 
 
 
234 aa  159  3e-38  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00042229  normal  0.158089 
 
 
-
 
NC_012918  GM21_2527  binding-protein-dependent transport systems inner membrane component  44.39 
 
 
232 aa  159  5e-38  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00176301 
 
 
-
 
NC_007948  Bpro_1758  binding-protein-dependent transport systems inner membrane component  51.27 
 
 
257 aa  157  1e-37  Polaromonas sp. JS666  Bacteria  normal  normal  0.175288 
 
 
-
 
NC_007796  Mhun_0520  binding-protein-dependent transport systems inner membrane component  41.94 
 
 
228 aa  153  2e-36  Methanospirillum hungatei JF-1  Archaea  normal  0.40002  normal  0.449442 
 
 
-
 
NC_010320  Teth514_1387  binding-protein-dependent transport systems inner membrane component  45.05 
 
 
232 aa  154  2e-36  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2303  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
231 aa  152  2.9999999999999998e-36  Methanosphaerula palustris E1-9c  Archaea  normal  0.105994  normal  0.374369 
 
 
-
 
NC_009483  Gura_3543  binding-protein-dependent transport systems inner membrane component  44.5 
 
 
232 aa  152  5e-36  Geobacter uraniireducens Rf4  Bacteria  normal  0.0152138  n/a   
 
 
-
 
NC_008553  Mthe_1203  binding-protein-dependent transport systems inner membrane component  38.68 
 
 
228 aa  151  8e-36  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_013223  Dret_2397  binding-protein-dependent transport systems inner membrane component  39.25 
 
 
231 aa  149  2e-35  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_3403  binding-protein-dependent transport systems inner membrane component  40.37 
 
 
229 aa  149  4e-35  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.669819  n/a   
 
 
-
 
NC_008609  Ppro_0891  binding-protein-dependent transport systems inner membrane component  43.46 
 
 
232 aa  148  9e-35  Pelobacter propionicus DSM 2379  Bacteria  normal  0.819313  n/a   
 
 
-
 
NC_010718  Nther_2285  binding-protein-dependent transport systems inner membrane component  46.11 
 
 
229 aa  147  2.0000000000000003e-34  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.000107267  normal 
 
 
-
 
NC_007517  Gmet_1040  binding-protein dependent transport system inner membrane protein  43.43 
 
 
228 aa  146  2.0000000000000003e-34  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000111264  hitchhiker  0.0000000335509 
 
 
-
 
NC_007644  Moth_0068  binding-protein dependent transport system inner membrane protein  41.98 
 
 
245 aa  145  4.0000000000000006e-34  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0463742  normal  0.217149 
 
 
-
 
NC_008825  Mpe_A2223  putative permease component of ABC transporter  55.02 
 
 
252 aa  145  7.0000000000000006e-34  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_2056  binding-protein-dependent transport systems inner membrane component  42.11 
 
 
238 aa  144  9e-34  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.202188  normal  0.0740354 
 
 
-
 
NC_012030  Hlac_3453  binding-protein-dependent transport systems inner membrane component  42.58 
 
 
238 aa  143  2e-33  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_008781  Pnap_1509  binding-protein-dependent transport systems inner membrane component  52.69 
 
 
254 aa  142  3e-33  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_009802  CCC13826_0203  ABC transporter, permease protein  37.88 
 
 
230 aa  142  4e-33  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2701  ABC transporter, permease protein  44.7 
 
 
228 aa  142  5e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2295  binding-protein-dependent transport systems inner membrane component  42.93 
 
 
238 aa  142  6e-33  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1131  ABC transporter, permease protein  38.91 
 
 
232 aa  140  9.999999999999999e-33  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1891  putative tungstate ABC transporter, permease protein  37.02 
 
 
228 aa  140  1.9999999999999998e-32  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1710  tungstate ABC transporter, permease protein, putative  37.02 
 
 
228 aa  139  3e-32  Campylobacter jejuni RM1221  Bacteria  normal  0.506083  n/a   
 
 
-
 
NC_013924  Nmag_3966  binding-protein-dependent transport systems inner membrane component  43.14 
 
 
238 aa  139  3e-32  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_008751  Dvul_2224  binding-protein-dependent transport systems inner membrane component  39.34 
 
 
231 aa  139  3.9999999999999997e-32  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal 
 
 
-
 
NC_008787  CJJ81176_1524  tungstate ABC transporter, permease protein, putative  37.02 
 
 
228 aa  139  4.999999999999999e-32  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1541  binding-protein-dependent transport systems inner membrane component  44.83 
 
 
217 aa  138  7e-32  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0915654  n/a   
 
 
-
 
NC_008346  Swol_1632  sulfate/tungstate ABC transporter permease  43.23 
 
 
225 aa  137  1e-31  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003505  ABC-type tungstate transport system permease protein  36.11 
 
 
232 aa  136  2e-31  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0123  ABC transporter, permease protein  37.89 
 
 
235 aa  136  2e-31  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.749352 
 
 
-
 
NC_012034  Athe_0825  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
210 aa  136  4e-31  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00592133  n/a   
 
 
-
 
NC_013525  Tter_1722  binding-protein-dependent transport systems inner membrane component  44.32 
 
 
239 aa  135  6.0000000000000005e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_02263  hypothetical protein  35.65 
 
 
232 aa  135  7.000000000000001e-31  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007347  Reut_A2781  binding-protein dependent transport system inner membrane protein  42.45 
 
 
232 aa  132  3.9999999999999996e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.24732  n/a   
 
 
-
 
NC_010682  Rpic_2866  binding-protein-dependent transport systems inner membrane component  46.73 
 
 
235 aa  132  3.9999999999999996e-30  Ralstonia pickettii 12J  Bacteria  normal  0.370655  normal 
 
 
-
 
NC_012856  Rpic12D_2460  binding-protein-dependent transport systems inner membrane component  46.73 
 
 
235 aa  132  3.9999999999999996e-30  Ralstonia pickettii 12D  Bacteria  normal  0.455343  normal  0.828531 
 
 
-
 
NC_009253  Dred_2270  binding-protein-dependent transport systems inner membrane component  44.78 
 
 
232 aa  132  3.9999999999999996e-30  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1777  binding-protein-dependent transport systems inner membrane component  40.67 
 
 
231 aa  132  5e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.753761  n/a   
 
 
-
 
NC_009438  Sputcn32_3880  binding-protein-dependent transport systems inner membrane component  38.97 
 
 
235 aa  132  6.999999999999999e-30  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0233  ABC transporter, permease protein  44.38 
 
 
232 aa  130  1.0000000000000001e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1681  binding-protein-dependent transport systems inner membrane component  36 
 
 
209 aa  130  2.0000000000000002e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2083  binding-protein-dependent transport systems inner membrane component  43.01 
 
 
235 aa  129  3e-29  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2631  transmembrane ABC transporter protein  47.29 
 
 
235 aa  128  7.000000000000001e-29  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0364359  normal  0.493142 
 
 
-
 
NC_008698  Tpen_1794  binding-protein-dependent transport systems inner membrane component  43.96 
 
 
218 aa  127  1.0000000000000001e-28  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_008345  Sfri_3918  binding-protein-dependent transport systems inner membrane component  38.07 
 
 
235 aa  127  2.0000000000000002e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0186248  n/a   
 
 
-
 
NC_007973  Rmet_2918  binding-protein-dependent transport systems inner membrane component  40.55 
 
 
232 aa  126  3e-28  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4039  binding-protein dependent transport system inner membrane protein  40.38 
 
 
250 aa  125  5e-28  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.564931 
 
 
-
 
NC_009635  Maeo_0472  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
234 aa  125  6e-28  Methanococcus aeolicus Nankai-3  Archaea  normal  0.183215  n/a   
 
 
-
 
NC_009901  Spea_4095  binding-protein-dependent transport systems inner membrane component  37.84 
 
 
235 aa  125  7e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_0569  binding-protein-dependent transport systems inner membrane component  52.34 
 
 
139 aa  124  1e-27  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_2781  binding-protein-dependent transport systems inner membrane component  42.41 
 
 
231 aa  121  8e-27  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009052  Sbal_0081  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
235 aa  115  3.9999999999999997e-25  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_4263  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
235 aa  115  3.9999999999999997e-25  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4318  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
235 aa  115  3.9999999999999997e-25  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4458  binding-protein-dependent transport systems inner membrane component  37.77 
 
 
235 aa  115  3.9999999999999997e-25  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1649  binding-protein-dependent transport systems inner membrane component  33.17 
 
 
231 aa  115  6e-25  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0086  binding-protein-dependent transport systems inner membrane component  37.16 
 
 
235 aa  114  1.0000000000000001e-24  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3684  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
235 aa  112  7.000000000000001e-24  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3968  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
235 aa  111  1.0000000000000001e-23  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3875  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
235 aa  109  3e-23  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_0123  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
235 aa  109  3e-23  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4720  ABC transporter, permease protein  36.7 
 
 
235 aa  109  4.0000000000000004e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_4078  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
235 aa  108  5e-23  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2630  binding-protein-dependent transport systems inner membrane component  37.98 
 
 
229 aa  104  1e-21  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1736  NifC-like ABC-type porter  28.77 
 
 
270 aa  82  0.000000000000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1555  molybdenum ABC transporter, permease protein  29.61 
 
 
241 aa  80.5  0.00000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3445  molybdate ABC transporter, inner membrane subunit  32.37 
 
 
223 aa  79.3  0.00000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_008701  Pisl_0047  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
214 aa  77.8  0.0000000000001  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0227  molybdate ABC transporter, permease protein  30.33 
 
 
224 aa  75.9  0.0000000000004  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5100  molybdate ABC transporter, permease protein  29.86 
 
 
224 aa  74.3  0.000000000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1532  molybdate ABC transporter permease  34.98 
 
 
221 aa  75.1  0.000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  0.633851  normal  0.0430142 
 
 
-
 
NC_003909  BCE_0221  molybdenum ABC transporter, permease protein, putative  29.38 
 
 
224 aa  73.9  0.000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0201  molybdenum ABC transporter permease  29.85 
 
 
229 aa  73.2  0.000000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009376  Pars_0644  binding-protein-dependent transport systems inner membrane component  34.39 
 
 
214 aa  73.2  0.000000000003  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
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