Gene Synpcc7942_1532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1532 
Symbol 
ID3774956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1591611 
End bp1592276 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content51% 
IMG OID637799965 
Productmolybdate ABC transporter permease 
Protein accessionYP_400549 
Protein GI81300341 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4149] ABC-type molybdate transport system, permease component 
TIGRFAM ID[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.633851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0430142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGAGG TATTGAGCCT TCTGACCCCC CTGTGGGTTT CCCTCAAAGT CGCTCTCTCA 
TCAACCCTAG TTGTGTTGGG AGTTGGGACC TTAGCGGGCT ATCAGATGAG TCGCTATCGA
GGGCGATCGC GATCGCTGAT TGAGGGTTGT TTAATTGCAC CGCTGATTAT GCCGCCAACG
GTCGTCGGCT TTATTCTATT GATGGTGTTG GGAAAGAGTA GTGTGATCGG GCAGTTTCTT
GCTCGTTATG ATTTGCAAAT TATTTTCACG ACTACCGGAG CTGCGATCGC AGCTAGTATT
GTTGCTTTCC CATTAATGTA TCGAGCGGCT CTGGGAGCAT TTGAGCAAAT TGATGCCCTC
CTTCTCGATG CGGCTCGCTT GGATGGAGCT TCAGAGGTAG AAGTGTTTTT CTGTATTGCC
CTGCCTTCAG CCTGGCCTGG CATCCTAGCA GGAACAGTGC TGACCTTTGC ACGGGCCTTG
GGTGAATTTG GAGCAACGCT GATGGTTGCT GGGAATATCC CCGGTCAAAC ACAAACGATG
CCGATGGCCA TCTACTTTGC AGTGGAAGCG GGTCAAACTC AAGAAGCTTG GTTTTGGACA
GTGATCATTT TGGGTACGGC CTATTGCGGC ATTGTTGCTG TCAATGCTTG GCAAGCCTTA
CGCTAG
 
Protein sequence
MTEVLSLLTP LWVSLKVALS STLVVLGVGT LAGYQMSRYR GRSRSLIEGC LIAPLIMPPT 
VVGFILLMVL GKSSVIGQFL ARYDLQIIFT TTGAAIAASI VAFPLMYRAA LGAFEQIDAL
LLDAARLDGA SEVEVFFCIA LPSAWPGILA GTVLTFARAL GEFGATLMVA GNIPGQTQTM
PMAIYFAVEA GQTQEAWFWT VIILGTAYCG IVAVNAWQAL R