More than 300 homologs were found in PanDaTox collection
for query gene Dtpsy_2476 on replicon NC_011992
Organism: Acidovorax ebreus TPSY



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011992  Dtpsy_2476  binding-protein-dependent transport systems inner membrane component  100 
 
 
242 aa  451  1.0000000000000001e-126  Acidovorax ebreus TPSY  Bacteria  normal  0.8915  n/a   
 
 
-
 
NC_008782  Ajs_3129  binding-protein-dependent transport systems inner membrane component  100 
 
 
245 aa  451  1.0000000000000001e-126  Acidovorax sp. JS42  Bacteria  normal  normal  0.682243 
 
 
-
 
NC_007908  Rfer_2869  binding-protein-dependent transport systems inner membrane component  79.31 
 
 
260 aa  297  1e-79  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1758  binding-protein-dependent transport systems inner membrane component  76.96 
 
 
257 aa  288  4e-77  Polaromonas sp. JS666  Bacteria  normal  normal  0.175288 
 
 
-
 
NC_012791  Vapar_1588  binding-protein-dependent transport systems inner membrane component  77.39 
 
 
251 aa  269  2.9999999999999997e-71  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1509  binding-protein-dependent transport systems inner membrane component  77.39 
 
 
254 aa  258  4e-68  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1813  putative permease component of ABC transporter  64.8 
 
 
238 aa  219  3e-56  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00043828 
 
 
-
 
NC_009379  Pnuc_1392  binding-protein-dependent transport systems inner membrane component  52.38 
 
 
231 aa  215  5e-55  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2437  binding-protein-dependent transport systems inner membrane component  55.41 
 
 
230 aa  214  8e-55  Chelativorans sp. BNC1  Bacteria  normal  0.829623  n/a   
 
 
-
 
NC_010725  Mpop_2968  binding-protein-dependent transport systems inner membrane component  52.38 
 
 
231 aa  208  5e-53  Methylobacterium populi BJ001  Bacteria  normal  0.946732  normal 
 
 
-
 
NC_010511  M446_3942  binding-protein-dependent transport systems inner membrane component  55.41 
 
 
231 aa  203  2e-51  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0272486 
 
 
-
 
NC_008043  TM1040_3765  binding-protein-dependent transport systems inner membrane component  56 
 
 
241 aa  202  5e-51  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5503  binding-protein-dependent transport systems inner membrane component  59.16 
 
 
241 aa  199  3.9999999999999996e-50  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3076  binding-protein-dependent transport systems inner membrane component  53.11 
 
 
231 aa  195  5.000000000000001e-49  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0752148  normal 
 
 
-
 
NC_010172  Mext_2850  binding-protein-dependent transport systems inner membrane component  52.63 
 
 
246 aa  193  2e-48  Methylobacterium extorquens PA1  Bacteria  normal  0.402937  normal 
 
 
-
 
NC_008340  Mlg_2740  binding-protein-dependent transport systems inner membrane component  55.05 
 
 
232 aa  189  4e-47  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.726638 
 
 
-
 
NC_010510  Mrad2831_6167  binding-protein-dependent transport systems inner membrane component  55.65 
 
 
230 aa  188  7e-47  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.931122 
 
 
-
 
NC_011894  Mnod_3625  binding-protein-dependent transport systems inner membrane component  52.78 
 
 
231 aa  186  2e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2223  putative permease component of ABC transporter  68.38 
 
 
252 aa  186  2e-46  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2806  binding-protein-dependent transport systems inner membrane component  50.22 
 
 
234 aa  182  3e-45  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0626  basic organic compound ABC-transporter  54.64 
 
 
228 aa  181  7e-45  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2397  binding-protein-dependent transport systems inner membrane component  46.98 
 
 
231 aa  172  3.9999999999999995e-42  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_3403  binding-protein-dependent transport systems inner membrane component  46.51 
 
 
229 aa  168  6e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.669819  n/a   
 
 
-
 
NC_007498  Pcar_0928  ABC-type transport system, permease subunit  44.59 
 
 
228 aa  166  4e-40  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0466  hypothetical protein  40 
 
 
235 aa  165  5.9999999999999996e-40  Methanocorpusculum labreanum Z  Archaea  normal  0.700584  normal 
 
 
-
 
NC_008700  Sama_0123  ABC transporter, permease protein  44.05 
 
 
235 aa  162  4.0000000000000004e-39  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.749352 
 
 
-
 
NC_009457  VC0395_A1131  ABC transporter, permease protein  43.44 
 
 
232 aa  161  7e-39  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0520  binding-protein-dependent transport systems inner membrane component  40.7 
 
 
228 aa  161  9e-39  Methanospirillum hungatei JF-1  Archaea  normal  0.40002  normal  0.449442 
 
 
-
 
NC_009051  Memar_1878  binding-protein-dependent transport systems inner membrane component  41.94 
 
 
231 aa  159  4e-38  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009051  Memar_1893  binding-protein-dependent transport systems inner membrane component  41.89 
 
 
233 aa  158  9e-38  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_010718  Nther_0328  binding-protein-dependent transport systems inner membrane component  41.33 
 
 
234 aa  157  2e-37  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00042229  normal  0.158089 
 
 
-
 
NC_013165  Shel_27150  ABC-type tungstate transport system, periplasmic component  41.23 
 
 
248 aa  156  3e-37  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.544705  normal 
 
 
-
 
NC_009802  CCC13826_0203  ABC transporter, permease protein  37.39 
 
 
230 aa  155  4e-37  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1777  binding-protein-dependent transport systems inner membrane component  48.37 
 
 
231 aa  155  7e-37  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.753761  n/a   
 
 
-
 
NC_009783  VIBHAR_02263  hypothetical protein  42.13 
 
 
232 aa  154  1e-36  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_4095  binding-protein-dependent transport systems inner membrane component  45.36 
 
 
235 aa  152  2.9999999999999998e-36  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0233  ABC transporter, permease protein  43.36 
 
 
232 aa  152  4e-36  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2224  binding-protein-dependent transport systems inner membrane component  46.15 
 
 
231 aa  152  5.9999999999999996e-36  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal 
 
 
-
 
NC_007517  Gmet_1040  binding-protein dependent transport system inner membrane protein  46.02 
 
 
228 aa  150  1e-35  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000111264  hitchhiker  0.0000000335509 
 
 
-
 
NC_013456  VEA_003505  ABC-type tungstate transport system permease protein  41.2 
 
 
232 aa  150  2e-35  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0028  binding-protein-dependent transport systems inner membrane component  41.15 
 
 
230 aa  150  2e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.000259316  normal  0.154621 
 
 
-
 
NC_010718  Nther_2285  binding-protein-dependent transport systems inner membrane component  48.24 
 
 
229 aa  149  4e-35  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.000107267  normal 
 
 
-
 
NC_002939  GSU2701  ABC transporter, permease protein  46.19 
 
 
228 aa  148  6e-35  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1891  putative tungstate ABC transporter, permease protein  38.71 
 
 
228 aa  147  2.0000000000000003e-34  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_1203  binding-protein-dependent transport systems inner membrane component  38.07 
 
 
228 aa  147  2.0000000000000003e-34  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_003912  CJE1710  tungstate ABC transporter, permease protein, putative  38.71 
 
 
228 aa  146  3e-34  Campylobacter jejuni RM1221  Bacteria  normal  0.506083  n/a   
 
 
-
 
NC_008787  CJJ81176_1524  tungstate ABC transporter, permease protein, putative  38.71 
 
 
228 aa  146  3e-34  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2781  binding-protein dependent transport system inner membrane protein  45.16 
 
 
232 aa  145  8.000000000000001e-34  Ralstonia eutropha JMP134  Bacteria  normal  0.24732  n/a   
 
 
-
 
NC_007963  Csal_2083  binding-protein-dependent transport systems inner membrane component  44.5 
 
 
235 aa  144  1e-33  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011832  Mpal_2303  binding-protein-dependent transport systems inner membrane component  40.38 
 
 
231 aa  144  2e-33  Methanosphaerula palustris E1-9c  Archaea  normal  0.105994  normal  0.374369 
 
 
-
 
NC_009438  Sputcn32_3880  binding-protein-dependent transport systems inner membrane component  44.76 
 
 
235 aa  144  2e-33  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3918  binding-protein-dependent transport systems inner membrane component  45.03 
 
 
235 aa  141  8e-33  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0186248  n/a   
 
 
-
 
NC_013522  Taci_1649  binding-protein-dependent transport systems inner membrane component  42.08 
 
 
231 aa  140  1.9999999999999998e-32  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_012029  Hlac_2056  binding-protein-dependent transport systems inner membrane component  43.2 
 
 
238 aa  140  1.9999999999999998e-32  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.202188  normal  0.0740354 
 
 
-
 
NC_011769  DvMF_2781  binding-protein-dependent transport systems inner membrane component  45.54 
 
 
231 aa  136  3.0000000000000003e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007644  Moth_0068  binding-protein dependent transport system inner membrane protein  39.66 
 
 
245 aa  134  9e-31  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0463742  normal  0.217149 
 
 
-
 
NC_010682  Rpic_2866  binding-protein-dependent transport systems inner membrane component  47.74 
 
 
235 aa  134  9e-31  Ralstonia pickettii 12J  Bacteria  normal  0.370655  normal 
 
 
-
 
NC_008322  Shewmr7_3968  binding-protein-dependent transport systems inner membrane component  43.78 
 
 
235 aa  134  9.999999999999999e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3684  binding-protein-dependent transport systems inner membrane component  45.91 
 
 
235 aa  134  9.999999999999999e-31  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2631  transmembrane ABC transporter protein  46.8 
 
 
235 aa  133  1.9999999999999998e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0364359  normal  0.493142 
 
 
-
 
NC_009831  Ssed_0123  binding-protein-dependent transport systems inner membrane component  46.7 
 
 
235 aa  133  1.9999999999999998e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3875  binding-protein-dependent transport systems inner membrane component  43.78 
 
 
235 aa  133  1.9999999999999998e-30  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4318  binding-protein-dependent transport systems inner membrane component  44.86 
 
 
235 aa  132  3.9999999999999996e-30  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4458  binding-protein-dependent transport systems inner membrane component  44.86 
 
 
235 aa  132  3.9999999999999996e-30  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_4263  binding-protein-dependent transport systems inner membrane component  44.86 
 
 
235 aa  132  3.9999999999999996e-30  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_4078  binding-protein-dependent transport systems inner membrane component  43.78 
 
 
235 aa  132  3.9999999999999996e-30  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0081  binding-protein-dependent transport systems inner membrane component  44.86 
 
 
235 aa  132  3.9999999999999996e-30  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2527  binding-protein-dependent transport systems inner membrane component  35.84 
 
 
232 aa  132  6e-30  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00176301 
 
 
-
 
NC_012856  Rpic12D_2460  binding-protein-dependent transport systems inner membrane component  47.24 
 
 
235 aa  131  9e-30  Ralstonia pickettii 12D  Bacteria  normal  0.455343  normal  0.828531 
 
 
-
 
NC_013743  Htur_2295  binding-protein-dependent transport systems inner membrane component  41.29 
 
 
238 aa  131  1.0000000000000001e-29  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_004347  SO_4720  ABC transporter, permease protein  44.32 
 
 
235 aa  131  1.0000000000000001e-29  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_0825  binding-protein-dependent transport systems inner membrane component  38.05 
 
 
210 aa  131  1.0000000000000001e-29  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00592133  n/a   
 
 
-
 
NC_009483  Gura_3543  binding-protein-dependent transport systems inner membrane component  38.38 
 
 
232 aa  130  3e-29  Geobacter uraniireducens Rf4  Bacteria  normal  0.0152138  n/a   
 
 
-
 
NC_007973  Rmet_2918  binding-protein-dependent transport systems inner membrane component  40.28 
 
 
232 aa  130  3e-29  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0086  binding-protein-dependent transport systems inner membrane component  44.02 
 
 
235 aa  129  5.0000000000000004e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2630  binding-protein-dependent transport systems inner membrane component  41.01 
 
 
229 aa  128  6e-29  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1694  binding-protein-dependent transport systems inner membrane component  34.96 
 
 
232 aa  128  1.0000000000000001e-28  Geobacter bemidjiensis Bem  Bacteria  normal  0.754071  n/a   
 
 
-
 
NC_012030  Hlac_3453  binding-protein-dependent transport systems inner membrane component  39.32 
 
 
238 aa  127  2.0000000000000002e-28  Halorubrum lacusprofundi ATCC 49239  Archaea  n/a    n/a   
 
 
-
 
NC_010320  Teth514_1387  binding-protein-dependent transport systems inner membrane component  42.08 
 
 
232 aa  125  5e-28  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1541  binding-protein-dependent transport systems inner membrane component  44.76 
 
 
217 aa  125  6e-28  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0915654  n/a   
 
 
-
 
NC_008346  Swol_1632  sulfate/tungstate ABC transporter permease  43.02 
 
 
225 aa  123  3e-27  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2270  binding-protein-dependent transport systems inner membrane component  41.55 
 
 
232 aa  122  4e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1722  binding-protein-dependent transport systems inner membrane component  40.62 
 
 
239 aa  122  4e-27  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008609  Ppro_0891  binding-protein-dependent transport systems inner membrane component  36.56 
 
 
232 aa  120  9.999999999999999e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.819313  n/a   
 
 
-
 
NC_007413  Ava_4039  binding-protein dependent transport system inner membrane protein  37.27 
 
 
250 aa  119  4.9999999999999996e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.564931 
 
 
-
 
NC_013517  Sterm_1681  binding-protein-dependent transport systems inner membrane component  35.78 
 
 
209 aa  119  6e-26  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_008698  Tpen_1794  binding-protein-dependent transport systems inner membrane component  42.38 
 
 
218 aa  117  1.9999999999999998e-25  Thermofilum pendens Hrk 5  Archaea  normal  n/a   
 
 
-
 
NC_013924  Nmag_3966  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
238 aa  116  3.9999999999999997e-25  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_010531  Pnec_0569  binding-protein-dependent transport systems inner membrane component  43.33 
 
 
139 aa  103  2e-21  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009635  Maeo_0472  binding-protein-dependent transport systems inner membrane component  29.91 
 
 
234 aa  98.2  9e-20  Methanococcus aeolicus Nankai-3  Archaea  normal  0.183215  n/a   
 
 
-
 
NC_008701  Pisl_0047  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
214 aa  87.8  1e-16  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_009376  Pars_0644  binding-protein-dependent transport systems inner membrane component  39.89 
 
 
214 aa  77.4  0.0000000000002  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_008786  Veis_2887  molybdate ABC transporter, inner membrane subunit  33.48 
 
 
226 aa  77  0.0000000000003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0388604  normal  0.0334765 
 
 
-
 
NC_010531  Pnec_0568  binding-protein-dependent transport systems inner membrane component  73.58 
 
 
60 aa  75.9  0.0000000000005  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009430  Rsph17025_4088  polysaccharide export protein  31.82 
 
 
279 aa  73.2  0.000000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.101815 
 
 
-
 
NC_010525  Tneu_0965  binding-protein-dependent transport systems inner membrane component  37.88 
 
 
214 aa  73.2  0.000000000004  Thermoproteus neutrophilus V24Sta  Archaea  normal  hitchhiker  0.00460897 
 
 
-
 
NC_013730  Slin_2343  molybdate ABC transporter, inner membrane subunit  31.37 
 
 
221 aa  71.2  0.00000000001  Spirosoma linguale DSM 74  Bacteria  normal  0.367672  normal  0.691187 
 
 
-
 
NC_011071  Smal_2227  molybdate ABC transporter, inner membrane subunit  33.51 
 
 
227 aa  71.2  0.00000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.262345  normal 
 
 
-
 
NC_009429  Rsph17025_3756  sulfate ABC transporter, periplasmic sulfate-binding protein  30.91 
 
 
277 aa  70.5  0.00000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_1555  molybdenum ABC transporter, permease protein  27.78 
 
 
241 aa  70.9  0.00000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
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