More than 300 homologs were found in PanDaTox collection
for query gene PCC7424_3008 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_3008  extracellular solute-binding protein family 3  100 
 
 
243 aa  492  9.999999999999999e-139  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_2671  extracellular solute-binding protein family 3  58.51 
 
 
285 aa  308  5.9999999999999995e-83  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3433  extracellular solute-binding protein family 3  58.51 
 
 
285 aa  308  6.999999999999999e-83  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2648  extracellular solute-binding protein family 3  35.84 
 
 
272 aa  153  2e-36  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3456  extracellular solute-binding protein family 3  35.84 
 
 
272 aa  153  2e-36  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_3405  extracellular solute-binding protein family 3  36.77 
 
 
276 aa  152  7e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.855565 
 
 
-
 
NC_008312  Tery_4514  extracellular solute-binding protein  33.73 
 
 
286 aa  133  3e-30  Trichodesmium erythraeum IMS101  Bacteria  normal  0.0322747  normal 
 
 
-
 
NC_011729  PCC7424_2874  extracellular solute-binding protein family 3  35.1 
 
 
298 aa  130  2.0000000000000002e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_4441  extracellular solute-binding protein family 3  33.17 
 
 
299 aa  119  4.9999999999999996e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_4503  extracellular solute-binding protein family 3  33.17 
 
 
299 aa  116  3.9999999999999997e-25  Cyanothece sp. PCC 8802  Bacteria  normal  0.101015  normal 
 
 
-
 
NC_007413  Ava_0774  extracellular solute-binding protein  33.5 
 
 
303 aa  107  2e-22  Anabaena variabilis ATCC 29413  Bacteria  normal  0.220084  hitchhiker  0.00138708 
 
 
-
 
NC_010682  Rpic_3666  extracellular solute-binding protein family 3  30.6 
 
 
301 aa  101  1e-20  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3343  extracellular solute-binding protein family 3  30.17 
 
 
301 aa  100  2e-20  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_5962  extracellular solute-binding protein family 3  32.47 
 
 
291 aa  99  7e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0396  extracellular solute-binding protein  30.38 
 
 
302 aa  98.2  1e-19  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0683  glutamate and aspartate transporter subunit  32 
 
 
302 aa  98.2  1e-19  Escherichia coli E24377A  Bacteria  normal  0.457568  n/a   
 
 
-
 
NC_012791  Vapar_1546  extracellular solute-binding protein family 3  31.44 
 
 
295 aa  97.1  2e-19  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_0676  glutamate and aspartate transporter subunit  31.11 
 
 
302 aa  96.3  4e-19  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0084  amino-acid-binding periplasmic (PBP) ABC transporter protein  29.74 
 
 
301 aa  95.9  6e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  0.767728  normal 
 
 
-
 
NC_011353  ECH74115_0748  glutamate and aspartate transporter subunit  31.11 
 
 
302 aa  95.5  7e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_2990  glutamate and aspartate transporter subunit  31.11 
 
 
302 aa  95.5  7e-19  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A0700  glutamate and aspartate transporter subunit  31.11 
 
 
302 aa  95.1  9e-19  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2971  extracellular solute-binding protein family 3  30.67 
 
 
302 aa  94.7  1e-18  Escherichia coli DH1  Bacteria  normal  0.871919  n/a   
 
 
-
 
NC_007951  Bxe_A0597  ABC glutamate/aspartate transporter, periplasmic ligand binding protein  30.4 
 
 
297 aa  94.7  1e-18  Burkholderia xenovorans LB400  Bacteria  normal  0.857613  normal  0.285453 
 
 
-
 
NC_008752  Aave_1937  extracellular solute-binding protein  32.35 
 
 
295 aa  93.6  2e-18  Acidovorax citrulli AAC00-1  Bacteria  normal  hitchhiker  0.00990957 
 
 
-
 
CP001509  ECD_00623  glutamate and aspartate transporter subunit  30.22 
 
 
302 aa  93.6  3e-18  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4737  extracellular solute-binding protein  31.88 
 
 
296 aa  93.2  3e-18  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.765927  normal 
 
 
-
 
NC_012892  B21_00613  hypothetical protein  30.22 
 
 
302 aa  93.6  3e-18  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3362  extracellular solute-binding protein family 3  30.8 
 
 
297 aa  93.2  3e-18  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00667639  hitchhiker  0.00000266778 
 
 
-
 
NC_007973  Rmet_0342  extracellular solute-binding protein  27.95 
 
 
302 aa  93.2  3e-18  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_2573  extracellular solute-binding protein  31.6 
 
 
297 aa  93.2  3e-18  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0113062 
 
 
-
 
NC_009832  Spro_1214  glutamate and aspartate transporter subunit  29.57 
 
 
298 aa  92.8  5e-18  Serratia proteamaculans 568  Bacteria  normal  0.839124  normal  0.912461 
 
 
-
 
NC_012880  Dd703_1103  extracellular solute-binding protein family 3  30 
 
 
298 aa  92.8  5e-18  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3766  extracellular solute-binding protein family 3  31.94 
 
 
300 aa  91.3  1e-17  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_2953  extracellular solute-binding protein family 3  29.57 
 
 
297 aa  91.7  1e-17  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0709  glutamate and aspartate transporter subunit  29.13 
 
 
302 aa  90.9  2e-17  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.222651  n/a   
 
 
-
 
NC_011080  SNSL254_A0723  glutamate and aspartate transporter subunit  29.13 
 
 
302 aa  90.9  2e-17  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C0783  glutamate and aspartate transporter subunit  29.13 
 
 
302 aa  90.9  2e-17  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.131708  normal 
 
 
-
 
NC_011205  SeD_A0770  glutamate and aspartate transporter subunit  29.13 
 
 
302 aa  90.9  2e-17  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0819  glutamate and aspartate transporter subunit  29.13 
 
 
302 aa  90.9  2e-17  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4740  extracellular solute-binding protein  30.2 
 
 
302 aa  90.9  2e-17  Burkholderia phymatum STM815  Bacteria  normal  0.220117  normal  0.273761 
 
 
-
 
NC_008554  Sfum_3163  extracellular solute-binding protein  30.6 
 
 
295 aa  89.4  5e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.180854  normal 
 
 
-
 
NC_010159  YpAngola_A1835  glutamate and aspartate transporter subunit  29.26 
 
 
305 aa  88.6  8e-17  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3010  glutamate and aspartate transporter subunit  29.26 
 
 
305 aa  88.6  8e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.197195  n/a   
 
 
-
 
NC_009708  YpsIP31758_2920  glutamate and aspartate transporter subunit  29.26 
 
 
305 aa  88.6  8e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.847133  n/a   
 
 
-
 
NC_010676  Bphyt_6965  extracellular solute-binding protein family 3  28.7 
 
 
312 aa  86.3  4e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5483  ABC amino acid transporter, periplasmic ligand binding protein  28.93 
 
 
306 aa  86.3  4e-16  Burkholderia sp. 383  Bacteria  normal  0.266855  normal 
 
 
-
 
NC_010551  BamMC406_2089  extracellular solute-binding protein  30.7 
 
 
306 aa  86.3  4e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  0.881502  normal 
 
 
-
 
NC_008390  Bamb_2212  extracellular solute-binding protein  30.7 
 
 
330 aa  85.9  6e-16  Burkholderia ambifaria AMMD  Bacteria  normal  0.424485  n/a   
 
 
-
 
NC_009436  Ent638_1182  glutamate and aspartate transporter subunit  28.89 
 
 
301 aa  85.9  6e-16  Enterobacter sp. 638  Bacteria  normal  normal  0.0650836 
 
 
-
 
NC_010002  Daci_0070  extracellular solute-binding protein  31.65 
 
 
293 aa  84.7  0.000000000000001  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1192  glutamate and aspartate transporter subunit  29.13 
 
 
298 aa  83.6  0.000000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4709  extracellular solute-binding protein  27.9 
 
 
299 aa  83.2  0.000000000000004  Burkholderia phymatum STM815  Bacteria  normal  0.866037  normal  0.0243654 
 
 
-
 
NC_011883  Ddes_1560  extracellular solute-binding protein family 3  29.46 
 
 
302 aa  82.4  0.000000000000006  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  unclonable  0.00000128549  n/a   
 
 
-
 
NC_007651  BTH_I1225  glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein  28.94 
 
 
298 aa  82.4  0.000000000000006  Burkholderia thailandensis E264  Bacteria  normal  0.905296  n/a   
 
 
-
 
NC_007969  Pcryo_0334  extracellular solute-binding protein  29.31 
 
 
330 aa  82  0.000000000000008  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_3396  glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein  28.94 
 
 
328 aa  81.6  0.000000000000009  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1475  extracellular solute-binding protein family 3  29.44 
 
 
297 aa  81.6  0.000000000000009  Ralstonia pickettii 12J  Bacteria  normal  0.027912  hitchhiker  0.000000000119497 
 
 
-
 
NC_009076  BURPS1106A_3431  glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein  28.94 
 
 
328 aa  81.6  0.000000000000009  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_3434  glutamate/aspartate periplasmic binding protein precursor  28.94 
 
 
297 aa  82  0.000000000000009  Burkholderia pseudomallei 1710b  Bacteria  normal  0.110135  n/a   
 
 
-
 
NC_013421  Pecwa_3139  glutamate and aspartate transporter subunit  28.7 
 
 
298 aa  82  0.000000000000009  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_4420  extracellular solute-binding protein  28.33 
 
 
297 aa  81.6  0.00000000000001  Delftia acidovorans SPH-1  Bacteria  normal  0.353088  normal 
 
 
-
 
NC_010508  Bcenmc03_2190  extracellular solute-binding protein  30.23 
 
 
306 aa  81.3  0.00000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0938958  normal 
 
 
-
 
NC_008062  Bcen_5904  extracellular solute-binding protein  30.23 
 
 
306 aa  81.3  0.00000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.104324  n/a   
 
 
-
 
NC_008542  Bcen2424_2173  extracellular solute-binding protein  30.23 
 
 
306 aa  81.3  0.00000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  0.694416  n/a   
 
 
-
 
NC_009524  PsycPRwf_0682  extracellular solute-binding protein  27.97 
 
 
334 aa  81.3  0.00000000000001  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0587  extracellular solute-binding protein family 3  29.69 
 
 
296 aa  80.9  0.00000000000002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0222  glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein  30.56 
 
 
299 aa  80.1  0.00000000000003  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4074  extracellular solute-binding protein  26.81 
 
 
314 aa  79.3  0.00000000000005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc2261  putative amino-acid-binding periplasmic (PBP) ABC transporter protein  28.27 
 
 
308 aa  79.3  0.00000000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.326987 
 
 
-
 
NC_009078  BURPS1106A_A0214  solute-binding family 1 protein  30.09 
 
 
299 aa  78.6  0.00000000000008  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0304  solute-binding family 1 protein  30.09 
 
 
299 aa  78.6  0.00000000000008  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1237  putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein  30.09 
 
 
299 aa  78.6  0.00000000000008  Burkholderia mallei NCTC 10229  Bacteria  normal  0.688343  n/a   
 
 
-
 
NC_006349  BMAA1934  putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein  30.09 
 
 
298 aa  78.6  0.00000000000008  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_0949  putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein  30.09 
 
 
298 aa  78.6  0.00000000000008  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1669  glutamate/aspartate periplasmic binding protein precursor  30.09 
 
 
299 aa  78.6  0.00000000000008  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6147  extracellular solute-binding protein  25.87 
 
 
298 aa  78.6  0.00000000000009  Methylobacterium sp. 4-46  Bacteria  normal  0.0888912  normal 
 
 
-
 
NC_009079  BMA10247_A2212  putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein  29.55 
 
 
359 aa  78.6  0.00000000000009  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0608  extracellular solute-binding protein  29.26 
 
 
296 aa  78.2  0.0000000000001  Acidovorax sp. JS42  Bacteria  normal  0.400599  normal 
 
 
-
 
NC_010084  Bmul_2714  extracellular solute-binding protein  27.66 
 
 
297 aa  78.2  0.0000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.784297 
 
 
-
 
NC_007204  Psyc_0303  ABC glutamate/aspartate transporter, periplasmic binding protein GltI  28.45 
 
 
319 aa  77.4  0.0000000000002  Psychrobacter arcticus 273-4  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4222  extracellular solute-binding protein  24.78 
 
 
303 aa  77  0.0000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.453219 
 
 
-
 
NC_007974  Rmet_4583  glutamate/aspartate ABC transporter periplasmic solute-binding protein  28.17 
 
 
304 aa  77.4  0.0000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.8955  decreased coverage  0.00199709 
 
 
-
 
NC_007973  Rmet_1123  extracellular solute-binding protein  27.95 
 
 
303 aa  77  0.0000000000003  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00011354  normal 
 
 
-
 
NC_010682  Rpic_0826  extracellular solute-binding protein family 3  26.38 
 
 
302 aa  76.6  0.0000000000003  Ralstonia pickettii 12J  Bacteria  normal  0.296945  normal 
 
 
-
 
NC_003295  RSc0973  amino-acid-binding periplasmic (PBP) ABC transporter protein  25.54 
 
 
303 aa  76.3  0.0000000000004  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00938185  normal  0.751269 
 
 
-
 
NC_007973  Rmet_0701  extracellular solute-binding protein  26.18 
 
 
302 aa  76.3  0.0000000000004  Cupriavidus metallidurans CH34  Bacteria  normal  0.969556  normal 
 
 
-
 
NC_011757  Mchl_4329  extracellular solute-binding protein family 3  26.27 
 
 
303 aa  76.3  0.0000000000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.240432 
 
 
-
 
NC_010172  Mext_3961  extracellular solute-binding protein  26.27 
 
 
303 aa  76.3  0.0000000000005  Methylobacterium extorquens PA1  Bacteria  normal  0.323027  normal 
 
 
-
 
NC_010682  Rpic_2466  extracellular solute-binding protein family 3  27.85 
 
 
307 aa  75.9  0.0000000000005  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_4438  extracellular solute-binding protein family 3  25.42 
 
 
303 aa  76.3  0.0000000000005  Methylobacterium populi BJ001  Bacteria  normal  normal  0.156595 
 
 
-
 
NC_012856  Rpic12D_2073  extracellular solute-binding protein family 3  27.85 
 
 
307 aa  75.9  0.0000000000006  Ralstonia pickettii 12D  Bacteria  hitchhiker  0.00884653  normal 
 
 
-
 
NC_010508  Bcenmc03_0636  extracellular solute-binding protein  28.09 
 
 
297 aa  75.5  0.0000000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2087  extracellular solute-binding protein  28.97 
 
 
305 aa  75.1  0.0000000000009  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3279  extracellular solute-binding protein family 3  26.79 
 
 
295 aa  74.7  0.000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013223  Dret_2153  extracellular solute-binding protein family 3  24.45 
 
 
273 aa  74.7  0.000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0684055 
 
 
-
 
NC_008390  Bamb_0564  extracellular solute-binding protein  27.23 
 
 
297 aa  74.7  0.000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6249  extracellular solute-binding protein  27.59 
 
 
313 aa  74.7  0.000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0122  substrate-binding periplasmic (PBP) ABC transporter protein  26.72 
 
 
299 aa  73.9  0.000000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5946  extracellular solute-binding protein  27.59 
 
 
313 aa  73.9  0.000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.310402  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>