| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0122 |
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| Symbol | |
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| ID | 1218925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 144106 |
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| End bp | 145005 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637236479 |
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| Product | substrate-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_518243 |
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| Protein GI | 17544841 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTCT CCGCGCGCAC GCGGCGGCTT GCCATGCTTG CCGTTCCCCT GGCGGTTTCC
GCTTTCCACG CCATGGCCTC CACCCCGACG CTGGATCGCA TCCGCGAAAC CGGCATCATC
CGGCTGGCCT ATCGCGAGGA CTCGGTCCCG TTTTCCTACA CCGACGGCGG CAAGCCGATC
GGCTATTCCA TCGACATCTG CTCGCGCGTG GTCGATGCCA TCCGCACCTC GCTCAAGCGG
CCGGAACTGA AGGTGCAGTA CCTGCCGGTG ACGGCGGCCA ACCGGATGGA CACCATCGCC
AGCGGCAAGG CCGACCTCGA GTGCGGCTCC ACCAACAACG CGCCGGAGCG CCGCGAGAAG
GTGGCCTTCA CCATCCCGCA CTACATCACC AAGGGCCGCA TGCTGGTCAA GGTGAGCTCG
GGCCTGCAGC AATGGGACGA CCTGCACGGC AAGACGGTGG TGGCCGCGCG CGGCTCGAGC
GCCTCCGACG TGATGCACAA GCTGAACGAC GCGACCGGCC TGGGCATGCG CACCGTGGAC
ACGAACGACC TGAAGACTGC GTTCGCCATG CTCAGCACCG GCAAGGCCGA TGCCTTCGCG
GGTGACGATG TGCTGCTCGC GGGTATGCGT GCCACCTCCG ACAACCCGTC GGACTACGTG
GTCGCCGGCA AGACGCAGCT GGTGTCGTCG TACGCCATGA TGATGAGCAA GCAGGATGCG
GACTTCAAGA AGCTGGTCGA CCAGTCGATG ACGCGCCTGA TCGTCGACGG CGAGGTGCAG
AAGCTCTACA AGAAGTGGTT CCAGCAGCCG ATTCCGCCCA ACAACCTGAA CCTGCAGATT
CCGATGAACC ATCTGCTGCG CGACTCCTTC AGCATCCCCA CCGACAGCGC CGGCAACTGA
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| Protein sequence | MLFSARTRRL AMLAVPLAVS AFHAMASTPT LDRIRETGII RLAYREDSVP FSYTDGGKPI
GYSIDICSRV VDAIRTSLKR PELKVQYLPV TAANRMDTIA SGKADLECGS TNNAPERREK
VAFTIPHYIT KGRMLVKVSS GLQQWDDLHG KTVVAARGSS ASDVMHKLND ATGLGMRTVD
TNDLKTAFAM LSTGKADAFA GDDVLLAGMR ATSDNPSDYV VAGKTQLVSS YAMMMSKQDA
DFKKLVDQSM TRLIVDGEVQ KLYKKWFQQP IPPNNLNLQI PMNHLLRDSF SIPTDSAGN
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