Gene Rpic_2466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2466 
Symbol 
ID6289818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2575101 
End bp2576024 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content60% 
IMG OID642626044 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001900032 
Protein GI187929545 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCT TGCATTCGAC CAAACGTATT CTGTGTGGCC TGACGCTGGC TGCGGCCGGT 
GCGCTGGCAA TGCTGTCGAC GGGCGCGCAG GCGGAGTCGA ACGACACGCT GGCCAAGATC
AAGCAATCGG GCGTGATCTC GGTGGGCTAT CGCGAGTCGT CGATTCCGTT CTCGTACCAG
GCTGACGCGA ACACCATCAC CGGCTATTCG CAAGAGATCT CCAACATGAT CGTCGCCGGC
GTGGAAAAGG CGGTGGGCAA GAAGCTGCAG GTCAAGCTCA CGCCGATCAC GTCGCAGAAC
CGCATCTCGC TGCTGCAGAA CGGCACGATC GACTTCGAAT GCGGCTCGAC CACCAACAAC
CTCGAGCGTC AGAAACAGGT CGCGTTCTCG AACAACATCT TCATTTACGG CATGCTGATG
CTGGTGAAGA AGGACTCGGG CATCAAGGAC TTTCCCGACC TGAAGGGCAA GACCGTGGTG
ACCACCGCCG GCACCACCGA AGACCGCATC CTGCAGAAGA TGAACGGCGA AGCCAAGGAC
GCCGACAAGA TGAATCTGAT CCTCGCCAAG GATCACGGCC AGGCGTTCCT GACGCTGGAA
TCGGGCCGCG CCGTGGCGTT CGTGATGGAC GAACCGCTGC TGTACGGCGA GCGCACCAAG
GCCAAGAACC AGGCCGACTG GGTGGTCACC GGCACGCCGC TGCAGACCGA AACCTACGCC
TGCATGATGC GCAAGGACGA TCCGGCGTTC AAGAAAGTGG CCGACGACGT GATTGCCGAT
CTGATGAAAT CGGGCAAGGC GAACGACTTG TACAAGAAGT GGTTCCTGTC GCCGATTCCG
CCGAAGGGCC TGAACCTGAA CTACCCGATG ACGGCCGGCA TGAAGGACTT GTACGCGCAC
CCGAACGACA AGGCCATTCA GTAA
 
Protein sequence
MKTLHSTKRI LCGLTLAAAG ALAMLSTGAQ AESNDTLAKI KQSGVISVGY RESSIPFSYQ 
ADANTITGYS QEISNMIVAG VEKAVGKKLQ VKLTPITSQN RISLLQNGTI DFECGSTTNN
LERQKQVAFS NNIFIYGMLM LVKKDSGIKD FPDLKGKTVV TTAGTTEDRI LQKMNGEAKD
ADKMNLILAK DHGQAFLTLE SGRAVAFVMD EPLLYGERTK AKNQADWVVT GTPLQTETYA
CMMRKDDPAF KKVADDVIAD LMKSGKANDL YKKWFLSPIP PKGLNLNYPM TAGMKDLYAH
PNDKAIQ