Gene EcDH1_2971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2971 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3193372 
End bp3194280 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content49% 
IMG OID 
Productextracellular solute-binding protein family 3 
Protein accessionACX40600 
Protein GI260450178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.871919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTAC GTAAACCTGC CACAGCAATC CTCGCCCTGG CGCTTTCCGC AGGACTGGCA 
CAGGCAGATG ACGCCGCCCC GGCAGCGGGC AGTACTCTGG ACAAAATCGC CAAAAACGGT
GTGATTGTCG TCGGTCACCG TGAATCTTCA GTGCCTTTCT CTTATTACGA CAATCAGCAA
AAAGTGGTGG GTTACTCGCA GGATTACTCC AACGCCATTG TTGAAGCAGT GAAAAAGAAA
CTCAACAAAC CGGACTTGCA GGTAAAACTG ATTCCGATTA CCTCACAAAA CCGTATTCCA
CTGCTGCAAA ACGGCACTTT CGATTTTGAA TGTGGTTCTA CCACCAACAA CGTCGAACGC
CAAAAACAGG CGGCTTTCTC TGACACTATT TTCGTGGTCG GTACGCGCCT GTTGACCAAA
AAGGGTGGCG ATATCAAAGA TTTTGCCAAC CTGAAAGACA AAGCCGTAGT CGTCACTTCC
GGCACTACCT CTGAAGTTTT GCTCAACAAA CTGAATGAAG AGCAAAAAAT GAATATGCGC
ATCATCAGCG CCAAAGATCA CGGTGACTCT TTCCGCACCC TGGAAAGCGG TCGTGCCGTT
GCCTTTATGA TGGATGACGC TCTGCTGGCC GGTGAACGTG CGAAAGCGAA GAAACCAGAC
AACTGGGAAA TCGTCGGCAA GCCGCAGTCT CAGGAGGCCT ACGGTTGTAT GTTGCGTAAA
GATGATCCGC AGTTCAAAAA GCTGATGGAT GACACCATCG CTCAGGTGCA GACCTCCGGT
GAAGCGGAAA AATGGTTTGA TAAGTGGTTC AAAAATCCAA TTCCGCCGAA AAACCTGAAC
ATGAATTTCG AACTGTCAGA CGAAATGAAA GCACTGTTCA AAGAACCGAA TGACAAGGCA
CTGAACTAA
 
Protein sequence
MQLRKPATAI LALALSAGLA QADDAAPAAG STLDKIAKNG VIVVGHRESS VPFSYYDNQQ 
KVVGYSQDYS NAIVEAVKKK LNKPDLQVKL IPITSQNRIP LLQNGTFDFE CGSTTNNVER
QKQAAFSDTI FVVGTRLLTK KGGDIKDFAN LKDKAVVVTS GTTSEVLLNK LNEEQKMNMR
IISAKDHGDS FRTLESGRAV AFMMDDALLA GERAKAKKPD NWEIVGKPQS QEAYGCMLRK
DDPQFKKLMD DTIAQVQTSG EAEKWFDKWF KNPIPPKNLN MNFELSDEMK ALFKEPNDKA
LN