| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4420 |
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| Symbol | |
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| ID | 5750008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4836197 |
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| End bp | 4837090 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641299522 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001565435 |
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| Protein GI | 160899853 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.353088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTTC GCCAGTGGGG AATTGCGTTG GGTGCGTTGG GCCTGTCGGC CTTGAGTTGT
GTATCTGCAG CCGGTGTGCT GGACAAGGTC CAGGCCGGTG GCGCGCTGGT GATTGCGCAC
CGGGAATCGT CGGTCCCCTT TTCCTACATC GACACGCGCA GCGGCAAGCC CGTCGGTTAT
GCGCTGGATC TGTGCCTTCG CCTGGCCGAG GCGGTGCGCA AGCAGACAGG CAGGAAGGAC
ATGAAGGTGG AGTTCCTGAT GGTCACGCCC GCCAATCGCA TGGCCGTGAT CGAGCAGGGC
AAGGCCGACA TGGAGTGCGG CTCGACCACG AACAACGCGC AGCGGCGCCA GACCGTGGCG
TTCACGGTCC CCCATTTCAT CACCGGCGCC CGGATGCTCG TGAAGGCCGA CAGCACCATC
AACGCGATGG AGGATCTCAA GGGCAAAAAG CTGGTTTCCA CCAAGGGCAC CAGCCCGATG
GCCCTGGTGA CTCAGGCCAA CAGGCAGCGC CTCATGGGCA TCACCATTGT GGAGGCCCCC
GATCACGCGA GGGCCCTGGA GATGGTGGAG AAGGGCGAAG CCGACGCGTT CGTGATGGAT
GACGTGCTTC TCAACGGGCT GGCCGCTGCA CGGCCCGATC CACGTGCCCT GAAGGTGGTG
GGCAAGTTCC TGTCCACCGA ACCCCTGGCG ATCATGCTGC CGAAGGCCGA TACCGCGTTC
AAGAAACTGG TCGATGAAGA GATGAAGCGG ATCATCACCA GCCGCGAAAT CCACCCCATC
TACGAGAAGT GGTTCCTGCA GCCGATTCCA CCCAACTCCA CGAATCTGAA CCTGCCGATC
AGCTACCTGC TGCGCGACTT CTGGAAGTAC CCCACGGCGG ACATTCTGCT GTAG
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| Protein sequence | MIFRQWGIAL GALGLSALSC VSAAGVLDKV QAGGALVIAH RESSVPFSYI DTRSGKPVGY
ALDLCLRLAE AVRKQTGRKD MKVEFLMVTP ANRMAVIEQG KADMECGSTT NNAQRRQTVA
FTVPHFITGA RMLVKADSTI NAMEDLKGKK LVSTKGTSPM ALVTQANRQR LMGITIVEAP
DHARALEMVE KGEADAFVMD DVLLNGLAAA RPDPRALKVV GKFLSTEPLA IMLPKADTAF
KKLVDEEMKR IITSREIHPI YEKWFLQPIP PNSTNLNLPI SYLLRDFWKY PTADILL
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