| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_0587 |
|---|
| Symbol | |
|---|
| ID | 7382961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 607433 |
|---|
| End bp | 608323 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643653898 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002552067 |
|---|
| Protein GI | 222109803 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTGCA AGCAAGGATG GAAGGCGCTG GGCGCCGCGG TGGCGCTGTG CTGCGCCGTG
GGCGCGCAAG CCCAAGGGGT GCTGGAGCGT GTGCGCGGCG GCGGACCGCT GGTGCTGGCG
CACCGTGAAT CGTCGGTGCC GTTTTCGTAC GTGCACGAGG GCAAGCCCAT GGGCTACGCC
CTGGACCTGT GCCTGCATAT CGCCGAAGTG GTGCGCAAGA AGACCGGCAT GAAGAACATG
CCGGTGCAGT TGGTGCAGGT GACACCCGCC AATCGCATTG AGATGGTGAA GACCGGCAAG
GCCGATATGG AATGCGGCTC CACCACCAAC AACGCCGAGC GCCGCAAGGA TGTGGCCTTC
ACCATTCCGC ACTTCATCAC GGGTGCGCGC CTGCTGGTGC CCGCGGCCAG CACGGTGACG
CGCATGGAGG ATCTGGAAGG CAAGAAGCTC GTGTCCACCA AAGGCACGAC GCCCTACAAA
GCGGCCGAGC AGGCCAACCG CGAACGGCTG ATGCGCATCC AGCTGGTGGA GGCGCCCGAC
CATGAGGCCG CGGTGGTCAT GGTGGAGAAG GGCCAAGCCG ACGCCTTCGT GATGGACGAT
GTGCTGTTGT ATGGCCTGGC GGCCAACCGC CCCGACCCCA AGGCGCTGAA GGTGGTGGGC
CGCTTCGTCA CCACTGAGCC GCTGGCGATC ATGCTTCCCA AGAACGATCC CGAGTTCAAG
AAGTTGGTGG ACGAGGAGAT GCGCCGCCTG ATCGTGAGCA ATGAGATCAA CGCCATCTAC
GACAAGTGGT TCATGCAGCC CATTGCGCCT ACCCACCGTG CGCTGAACCT GCCCGTGAGC
TACCTGCTGC GGGACTTCTG GAAATACCCT ACCGATCAGG TCCCCTTCTG A
|
|---|
| Protein sequence | MNCKQGWKAL GAAVALCCAV GAQAQGVLER VRGGGPLVLA HRESSVPFSY VHEGKPMGYA
LDLCLHIAEV VRKKTGMKNM PVQLVQVTPA NRIEMVKTGK ADMECGSTTN NAERRKDVAF
TIPHFITGAR LLVPAASTVT RMEDLEGKKL VSTKGTTPYK AAEQANRERL MRIQLVEAPD
HEAAVVMVEK GQADAFVMDD VLLYGLAANR PDPKALKVVG RFVTTEPLAI MLPKNDPEFK
KLVDEEMRRL IVSNEINAIY DKWFMQPIAP THRALNLPVS YLLRDFWKYP TDQVPF
|
|---|
| |