Gene Mpop_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4438 
Symbol 
ID6308815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4733369 
End bp4734280 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content68% 
IMG OID642653118 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001927072 
Protein GI188583627 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.156595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTGA GTCACGCGCT TCTCCTCGCC GCCCTCGCGA TTTCGGCGGC CACCGCGCCG 
GCCCGCGCGC AGGAGTTGAG CGGAACCCTC AAGAAGGTGA AGGACACCGG CGCGATCACC
ATCGGCTACC GCGACGCCTC GGTGCCGTTC TCCTATCTCG ACGGGAATCA GAAGCCGGTG
GGCTACGCCT TCGAGATCTG TCTCCAGGTC GCCGACGCGG TCAAAGCGCA TCTGAAGCGC
GACACGCTGG AGGTGCGGCT CAATCCGGTC ACCTCGGCCA CCCGCATCCC GCTGATCGCC
AACGGGACGA TCGACCTCGA ATGCGGCTCG ACCACCAACA ACGCCGACCG GCAGCGGCAG
GCCGCCTTCA CCAACACCCA TTTCCTCACC GCGACGCGCT TCGTCGCCAA GCGGGAGAAG
GGGCTCGACA AGACCGACGA CCTCAAGGGC CGCACCGTGG TCTCGACCTC GGGCACCACC
AACATCCGCC AGATCAACGA GATCAACACC GCCCGCGGCC TCGGGATGCG GATCCTGCCG
GCCAAGGACC ACGCGGAAGC CTTCCTGATG GTCGAGACCG GACGCGCCGA CGCCTTCGTG
ATGGACGACG TGCTGCTCGC CGCCCTCGTC GCCAGCTCGA AGACGCCCGA CGCCTACGCG
ATCTCCTCGG AGGCGCAGTC GCGGCCGGAG CCCTACGGCA TCATGCTGCG CAAGGACGAT
CCGGCCTTCA AGGCCGTGGT CGATGCCGCG ACCGCCGCGC TCTACCGGAG CCCGGAGGGC
CGGGCGCTCT ACGAGAAGTG GTTCACGCAG CCCATCCCGC CGCGGGGCAT CAACCTGAAG
CTGCCGATGA GCGAGGCGAT GCAGAAGGTC TTCGCCAACC CCAGCGACAG CCCGGACCCG
GCCGCCTACT GA
 
Protein sequence
MHLSHALLLA ALAISAATAP ARAQELSGTL KKVKDTGAIT IGYRDASVPF SYLDGNQKPV 
GYAFEICLQV ADAVKAHLKR DTLEVRLNPV TSATRIPLIA NGTIDLECGS TTNNADRQRQ
AAFTNTHFLT ATRFVAKREK GLDKTDDLKG RTVVSTSGTT NIRQINEINT ARGLGMRILP
AKDHAEAFLM VETGRADAFV MDDVLLAALV ASSKTPDAYA ISSEAQSRPE PYGIMLRKDD
PAFKAVVDAA TAALYRSPEG RALYEKWFTQ PIPPRGINLK LPMSEAMQKV FANPSDSPDP
AAY