| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0334 |
|---|
| Symbol | |
|---|
| ID | 4033616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 404812 |
|---|
| End bp | 405804 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637972783 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_579602 |
|---|
| Protein GI | 93005165 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACT TACTTTCTAC CTCTATATCC AAACCATTAA CGTTAGTTGC CTTTATGGCA
CTAGCTCTAG CAGGCTGTAA CAACAATAGC CAAACCAGTA ATGAGGCGAC GCCAGCAGAT
GGAGCAACCA CCGAGGCGAC GGCAAATACC AACGGCACCT TAGATAAAAT TAAAGAATCA
GGCACCATCG TCGTCGGTCA CCGTGACTCT TCCATTCCGT TCTCATACAT CGCTGATGAT
CCAAATCAGC CGATCGGCTA TGCTCATGAT TTAGAGATGA AAGTGGTAGA AGCTGTCAAA
CAAAAGCTCA ATATGCCAGA TCTAAAAATC CGCTATAACC TTATTACCTC ACAAACACGC
ATCCCATTAG TACAAAATGG TACAGTAGAT TTTGAGTGTG GTTCAACAAC CAATAATGAA
GAGCGTCAGA AACAAGTCGC TTTTTCTAAC GGCTTCTTTG AAATCGGTAC GCGTTTATTG
ACCAAAAAAG ATTCAGGTAT CCAAGGTTTC GATGATTTAA AGGGTAAAAC CTTAGTCACG
ACTGCAGGTA CAACTTCAGA GCGTTATATT CGTGAATACA ACGACGATAA AAAGATGAAT
ATCAATGTCA TCTCAGCAAA AGACCATGGC GAAGGTTTCT TGATGCTAGA GAATGGTCGT
GCCGATGCCT TTATGATGGA TGATGTATTG CTAGCAGGCG AAAAAGCCAA AGCCAAAAAT
CCCGATGAAT GGGTCATTGT TGGTGAGCCA CAATCGTTTG AGATTTATGG TTGTATGATG
CGTAAAGACG ATCCAGAATT TAAAGCCGTG GTCGATGAAG CACTAGCCAA TGTCTTTAAG
TCAGGCGAGA TCAATAGCAT CTATGACAAA TGGTTCTTAA ATCCAATTCC ACCAAAAAAT
GTCAATCTAA AGTTTGAGAT GTCAGATAAC TTAAAAGCGT TGATTGCCAA TCCACATGAT
AGCGATCAGC CAAAAGTAGC GACTGCGCAA TAA
|
|---|
| Protein sequence | MTYLLSTSIS KPLTLVAFMA LALAGCNNNS QTSNEATPAD GATTEATANT NGTLDKIKES
GTIVVGHRDS SIPFSYIADD PNQPIGYAHD LEMKVVEAVK QKLNMPDLKI RYNLITSQTR
IPLVQNGTVD FECGSTTNNE ERQKQVAFSN GFFEIGTRLL TKKDSGIQGF DDLKGKTLVT
TAGTTSERYI REYNDDKKMN INVISAKDHG EGFLMLENGR ADAFMMDDVL LAGEKAKAKN
PDEWVIVGEP QSFEIYGCMM RKDDPEFKAV VDEALANVFK SGEINSIYDK WFLNPIPPKN
VNLKFEMSDN LKALIANPHD SDQPKVATAQ
|
|---|
| |