| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_3961 |
|---|
| Symbol | |
|---|
| ID | 5835618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 4402392 |
|---|
| End bp | 4403303 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641369752 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001641403 |
|---|
| Protein GI | 163853360 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.323027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCTGA GTCATGCGCT TTTCCTCGCC GCCCTCGCGA TTTCGGCGGC CACGGCACCG
GTCGGCGCGC AGGAGTTGAG CGGAACCCTC AAGAAGGTGA AGGACACGGG CGCCATCACC
ATCGGCTATC GCGACGCCTC GGTGCCGTTC TCCTATCTCG ACGGCAATCA GAAGCCGGTG
GGCTACGCCT TCGAGATCTG TCTCAAGGTC GCCGACGCGG TCAAAGCGCA TCTGAAGCTC
GACACGCTGG AGGTGCGGCT CAACCCCGTC ACCTCCGCGA CCCGCATCCC GCTGATCGCC
AACGGGACGA TCGACCTCGA ATGCGGCTCG ACCACCAACA ACGCCGACCG GCAGCGGCAG
GCGGCCTTCA CCAACACCCA CTTCCTCACC GCGACACGCT TCGTCGCCAA GCGGGACAAG
GGGCTCGACA AGACCGACGA CCTCAAGGGC CGCACCGTGG TCTCGACCTC GGGCACCACC
AACATCCGCC AGATCAACGA GATCAACACC GCCCGGGGCC TCGGCATGCG GATCCTGCCG
GCCAAGGACC ACGCCGAGGC CTTCCTGATG GTCGAGACCG GCCGCGCCGA CGCCTTCGTG
ACGGACGACG TGCTGCTCGC CGCCCTCGTC GCCGGATCGA AGACGCCCGA CGCCTACGCG
ATCTCCTCGG AGGCGCAGTC GCGCCCCGAG CCCTACGGCA TCATGCTGCG CAAGGACGAC
CCGGCCTTCA AGGCCGTGGT CGATGCCGCC ACCGCCGCCC TCTACAAGAG CCCGGAGGGG
ACGGCGCTCT ACGAGAAGTG GTTCACGCAA GCCATCCCGC CGCGGGGCAT CAACCTGAAG
CTCCCGATGA GCGAGGCGAT GCGGAAGGCC TTGGCCAACC CCAGCGACAG CCCTGACCCG
GCGGCCTACT GA
|
|---|
| Protein sequence | MHLSHALFLA ALAISAATAP VGAQELSGTL KKVKDTGAIT IGYRDASVPF SYLDGNQKPV
GYAFEICLKV ADAVKAHLKL DTLEVRLNPV TSATRIPLIA NGTIDLECGS TTNNADRQRQ
AAFTNTHFLT ATRFVAKRDK GLDKTDDLKG RTVVSTSGTT NIRQINEINT ARGLGMRILP
AKDHAEAFLM VETGRADAFV TDDVLLAALV AGSKTPDAYA ISSEAQSRPE PYGIMLRKDD
PAFKAVVDAA TAALYKSPEG TALYEKWFTQ AIPPRGINLK LPMSEAMRKA LANPSDSPDP
AAY
|
|---|
| |