Gene Dd703_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1103 
Symbol 
ID8087658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1261564 
End bp1262460 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content52% 
IMG OID644835179 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002986730 
Protein GI242238549 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTGC GTCAACTGGC ACTGTCACTG CTGCTGGCAG GCATAGCAAC CACTGTGGTT 
CATGCAGAAG AAAAACCGAT CCCCACGTTG CAGAAAGTCA AAGATAGCGG CGTTATCGTT
ATCGGCCATC GCGAATCTTC CGTGCCATTC TCCTACTACG ATAATCAGCA GAAGGTTGTC
GGCTATTCAC AGGATTATTC CGACAAGATT GTTGAAGCCG TCAAGAAGGC CGTCAACGCC
CCCAATCTGC AGGTAAAACT GATCCCCATT ACCTCGCAGA ACCGGATTCC GCTGTTGCAG
AACGGTACCT TTGATCTGGA ATGTGGTTCA ACCACCAACA ACCTGGAGCG TCAGCAGCAG
GCTGCCTTCT CCAATACCAT CTTCGTCATC GGCACTCGTC TGTTGACCAA AAAAGGCTCT
GACATCAAAG ATTTCAGCGA TCTAAACGGT AAGGCCGTAG TGGTCACATC CGGCACAACG
TCGGAAATCT TGCTGAACAA GATGAATGAA GAGAAGAAAA TGAATCTGCG CATCATCAGC
GCCAAAGACC ATGGCGATTC ATTCCGCACG CTGGAAAGCG GTCGCGCCGT CGCCTTTATG
ATGGATGACG CGCTGCTGGC TGGCGAACGC GCCAAGGCCA AAAACCCGGA TGAATGGGTG
ATTGTCGGCA CACCGCAGTC ACACGAAGCC TACGGTTGCA TGCTGCGCAA GAACGATCCT
GAGTTCAAGA AACTGGTGGA CGACACCATC GCCCAGGCGC AAACCTCCGG CGAAGCGGTG
AAATGGTATG AGCACTGGTT CACCCAGCCC ATTCCTCCTA AAAATCTCAA CCTGAACTAT
GTACTGTCCG ACGACATGAA AGCACTGTTC AAAGCACCTA ACGATAAGGC GCTGTAA
 
Protein sequence
MQLRQLALSL LLAGIATTVV HAEEKPIPTL QKVKDSGVIV IGHRESSVPF SYYDNQQKVV 
GYSQDYSDKI VEAVKKAVNA PNLQVKLIPI TSQNRIPLLQ NGTFDLECGS TTNNLERQQQ
AAFSNTIFVI GTRLLTKKGS DIKDFSDLNG KAVVVTSGTT SEILLNKMNE EKKMNLRIIS
AKDHGDSFRT LESGRAVAFM MDDALLAGER AKAKNPDEWV IVGTPQSHEA YGCMLRKNDP
EFKKLVDDTI AQAQTSGEAV KWYEHWFTQP IPPKNLNLNY VLSDDMKALF KAPNDKAL