| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_1237 |
|---|
| Symbol | |
|---|
| ID | 4789254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008835 |
|---|
| Strand | + |
|---|
| Start bp | 1296350 |
|---|
| End bp | 1297249 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | putative glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein |
|---|
| Protein accession | YP_001025039 |
|---|
| Protein GI | 124381383 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.688343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAAC CCCTCCGCCC GTTGCTCTCG ATCGCCGTCG GCTGCGCGCT CGCCGCCGCC
GCGCACGCGA ACGACGCCGG CCCGACGCTG AAGAAGATTC GCGATACCGG CGTCGTCACG
CTCGGCGTGC GCGAATCGTC CGTTCCGTTC TCCTACTACG ATCAGCAGCA ACGGACGATC
GGCTACTCGC AGGAAATCGC GCTGAAGATC GTCGACGAAA TCAAGAAGAC GCTGAACCGG
CCGAACCTGA CGGTCCGCGA GATTCCGATC ACGTCGCAGA ACCGCATTCC GCTCGTGCAG
AACGGCACCG TCGACCTGGA GTGCGGCTCG ACCACGCACA CGAAGGAGCG CGCGAACCAG
GTGTCGTTCT CGAACAGCAT CTTTCAATAC GGGATGCGCC TGATCGTGAA GAAGTCCTCC
GGCGTGAAGG ATTTCCCCGA TCTCGCCGGC AAGACCGTCG CGACGACGGC GGGCACGACC
GAGGAGCGGC TGCTGCGGCA ATGGAACGCC GAGAAAGGCA TGGCGATGCA GATCATCAGC
GCGAAGGATC ACGCCGACGC GTTCCTGAAC GTGAAGAGCG GCCGCGCGGT CGCGTTCTTC
ATGGACGAGC CGCTGCTGTA CGGCGCGAAG GCGAAGGAAG CGAACCCGGG CGACTACGTG
ATCACGGGCA ATTCACCGGT ATCCGAAGCG TATGGCTGCA TGCTGCGCAA GGACGACCCC
GGCTTCAAGC AGCTCGCGGA TCGCGTGATC GCGCGGATGC AGCGCTCCGG CGAGGCCGAG
GCGCTATACG TGAAGTGGTT CAACCGGCCG ATACCGCCGA AGGGCGTCAA TCTCGACTAT
CCGCTGTCGG CGGACATGAA GCAGCTGTTC GCGAATCCGA ACGACAAGGC CCTCGATTGA
|
|---|
| Protein sequence | MMKPLRPLLS IAVGCALAAA AHANDAGPTL KKIRDTGVVT LGVRESSVPF SYYDQQQRTI
GYSQEIALKI VDEIKKTLNR PNLTVREIPI TSQNRIPLVQ NGTVDLECGS TTHTKERANQ
VSFSNSIFQY GMRLIVKKSS GVKDFPDLAG KTVATTAGTT EERLLRQWNA EKGMAMQIIS
AKDHADAFLN VKSGRAVAFF MDEPLLYGAK AKEANPGDYV ITGNSPVSEA YGCMLRKDDP
GFKQLADRVI ARMQRSGEAE ALYVKWFNRP IPPKGVNLDY PLSADMKQLF ANPNDKALD
|
|---|
| |