Gene PCC7424_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_3279 
Symbol 
ID7107757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp3674886 
End bp3675773 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content40% 
IMG OID643481523 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002378546 
Protein GI218440217 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TAACCCTAGC TCTTTTGAGT CTTGCTTTTA CCTTAGCATT ACCCCTAAAA 
TCTGGAGCAG AAACCGTTTT AGAAAGAGTA GCCCGGACAG GAGTGTTAAC AGTCGGTACG
CCCACTGATA TTGTGCCCCT AGCTTATGTC AATGAGCAAC AAGAACTGGT AGGTTATTCA
GTTGATTTTC TTAATCTTCT TAAAGACCAA ATTCAGACGC AATTGGGCAG AGAAATTGCC
CTACAATTTG TAGAAATTAC TCCTTCCGAT GGAATTCCTA AACTGATGAG CGAGGAAGTT
GATATTATCT GTAATGCTGG CTTTAGTTGG GAGCGAGATA AATTTGTTGA TTTTTCCCTC
AGTATGGGAA TTAGTGGCAC TCAAATCTTA GTCAAACAAA ACACTAACTT AGGTTCTATT
GACTCTTTAA AAGGGAAACG GGTGGCGGCT ATTCCTAAAA CCATCGCCGA ACAAGTGATC
CGGGTTTCAC AACCCGACGC AACGGTTGTA ACAGTAGAGT CAATGCAACA GGGTTTTGAG
GCAGTAGAAC AGGGAAAAGT TGATGCTTTT GCCGCCGATG GAATTATCTT AGAAGGTTAT
CAGCAAACCG TAAGCCAGCC CAATGCCTAT AAAGTTGTAC CCGAACAGCC TTATAATCGG
CAAGGTATAG CCTGTATGGT TCCGGAAAAT AACTCTAAAT TTTTAGATAC GATAAATTTT
ACCATTGTGA GACTGATGCA AGGATATTTA GCTCAAGAAC CCAGTTCAGT TGAAATTATC
GAGCGCTGGT TTGGTTCTCA AGGAATTATT ACGGTGGAGC CGGAGTTAAT TCGCAATTAT
TTTCAAGATG TCATCAATTC GAGAGAGCAA ATTTTTATTC AACAATAG
 
Protein sequence
MKKLTLALLS LAFTLALPLK SGAETVLERV ARTGVLTVGT PTDIVPLAYV NEQQELVGYS 
VDFLNLLKDQ IQTQLGREIA LQFVEITPSD GIPKLMSEEV DIICNAGFSW ERDKFVDFSL
SMGISGTQIL VKQNTNLGSI DSLKGKRVAA IPKTIAEQVI RVSQPDATVV TVESMQQGFE
AVEQGKVDAF AADGIILEGY QQTVSQPNAY KVVPEQPYNR QGIACMVPEN NSKFLDTINF
TIVRLMQGYL AQEPSSVEII ERWFGSQGII TVEPELIRNY FQDVINSREQ IFIQQ