Gene Rmet_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_0342 
Symbol 
ID4037129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007973 
Strand
Start bp360492 
End bp361400 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content63% 
IMG OID637975716 
Productextracellular solute-binding protein 
Protein accessionYP_582497 
Protein GI94309287 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGT TCTTCATGAC CCGTGCCGCC GTGCTGATGG CGGTGTCGCT CGGCGCCGGT 
TCGGCGCTTG CGGTCGACGT GGCCGCCAGC CCAACGCTCA GCAAGATCAA ATCGTCCGGC
ACGATTTCGA TCGGTCACCG CACATCGTCG ATCCCGTTCT CGTACTACGA CGCGAACCAG
AAGGTGATCG GCTTCTCGCA GGACATCTGC GATCGCGTGA TTGATGCGGT CAAGAAGGAA
ACCGGCACGC CGAATCTGCA GGTGCGCATG GTGCCCGTGA CGTCGCAGAA CCGGCAGTCG
CTGGTCCAGA ATGGCACGGT GGACCTGGAG TGTGGCGTGA CCACCAACCT GAAGTCGCGC
CAGCAGCAGG TGGCGTTCTC CACCACGTTC TTCGTGGCCG GCACGCGACT GCTGGTGAAG
AAGGGCAGCC CGGTCCATGA CTTCGGCGAT CTGTCGGGCA AGGCCGTGGT GACGAACGCC
GGCACCACGT CGGAACGCAT CCTGCGCAAG CTCAACGACG AGAAGGGCGC CAACATCACG
ATCCAGAGCG CCAAGGACTA TGGCGAATCG TTCCTGATCC TGCAGTCGGG CCGCGTGGCC
GCGTTCATGA TGGACGACGT GCTGCTGTCC GGCTCGCGCA CGCTGGCGCC GAACCCCAAT
GACTGGGTGG TGGTGGGCAC GCCGCAGTCG TTCGAGGCGT ACGGCTTCAT GATGCGCAAG
GATGACCCCG GCTTCAAACA AGTCGTGGAT GCCACCACGA CGGGCCTGAT GCGCAGCGGC
GAGATCAACA CGCTCTACAC CAAGTGGTTC CTGAAGCCGG TGCCGCCGAA GAACCTCAGC
TTCGACTTGC CGCAGAGCGA GCAGATCAAG AAGGCCTACG CCAATCCGAA TGATGAGGCG
TTCGAGTAA
 
Protein sequence
MNQFFMTRAA VLMAVSLGAG SALAVDVAAS PTLSKIKSSG TISIGHRTSS IPFSYYDANQ 
KVIGFSQDIC DRVIDAVKKE TGTPNLQVRM VPVTSQNRQS LVQNGTVDLE CGVTTNLKSR
QQQVAFSTTF FVAGTRLLVK KGSPVHDFGD LSGKAVVTNA GTTSERILRK LNDEKGANIT
IQSAKDYGES FLILQSGRVA AFMMDDVLLS GSRTLAPNPN DWVVVGTPQS FEAYGFMMRK
DDPGFKQVVD ATTTGLMRSG EINTLYTKWF LKPVPPKNLS FDLPQSEQIK KAYANPNDEA
FE