Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_0342 |
Symbol | |
ID | 4037129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007973 |
Strand | + |
Start bp | 360492 |
End bp | 361400 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637975716 |
Product | extracellular solute-binding protein |
Protein accession | YP_582497 |
Protein GI | 94309287 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGT TCTTCATGAC CCGTGCCGCC GTGCTGATGG CGGTGTCGCT CGGCGCCGGT TCGGCGCTTG CGGTCGACGT GGCCGCCAGC CCAACGCTCA GCAAGATCAA ATCGTCCGGC ACGATTTCGA TCGGTCACCG CACATCGTCG ATCCCGTTCT CGTACTACGA CGCGAACCAG AAGGTGATCG GCTTCTCGCA GGACATCTGC GATCGCGTGA TTGATGCGGT CAAGAAGGAA ACCGGCACGC CGAATCTGCA GGTGCGCATG GTGCCCGTGA CGTCGCAGAA CCGGCAGTCG CTGGTCCAGA ATGGCACGGT GGACCTGGAG TGTGGCGTGA CCACCAACCT GAAGTCGCGC CAGCAGCAGG TGGCGTTCTC CACCACGTTC TTCGTGGCCG GCACGCGACT GCTGGTGAAG AAGGGCAGCC CGGTCCATGA CTTCGGCGAT CTGTCGGGCA AGGCCGTGGT GACGAACGCC GGCACCACGT CGGAACGCAT CCTGCGCAAG CTCAACGACG AGAAGGGCGC CAACATCACG ATCCAGAGCG CCAAGGACTA TGGCGAATCG TTCCTGATCC TGCAGTCGGG CCGCGTGGCC GCGTTCATGA TGGACGACGT GCTGCTGTCC GGCTCGCGCA CGCTGGCGCC GAACCCCAAT GACTGGGTGG TGGTGGGCAC GCCGCAGTCG TTCGAGGCGT ACGGCTTCAT GATGCGCAAG GATGACCCCG GCTTCAAACA AGTCGTGGAT GCCACCACGA CGGGCCTGAT GCGCAGCGGC GAGATCAACA CGCTCTACAC CAAGTGGTTC CTGAAGCCGG TGCCGCCGAA GAACCTCAGC TTCGACTTGC CGCAGAGCGA GCAGATCAAG AAGGCCTACG CCAATCCGAA TGATGAGGCG TTCGAGTAA
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Protein sequence | MNQFFMTRAA VLMAVSLGAG SALAVDVAAS PTLSKIKSSG TISIGHRTSS IPFSYYDANQ KVIGFSQDIC DRVIDAVKKE TGTPNLQVRM VPVTSQNRQS LVQNGTVDLE CGVTTNLKSR QQQVAFSTTF FVAGTRLLVK KGSPVHDFGD LSGKAVVTNA GTTSERILRK LNDEKGANIT IQSAKDYGES FLILQSGRVA AFMMDDVLLS GSRTLAPNPN DWVVVGTPQS FEAYGFMMRK DDPGFKQVVD ATTTGLMRSG EINTLYTKWF LKPVPPKNLS FDLPQSEQIK KAYANPNDEA FE
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