| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2153 |
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| Symbol | |
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| ID | 8420004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2449379 |
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| End bp | 2450200 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645038747 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003199015 |
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| Protein GI | 258406273 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0684055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGA TGGTACTTTT GTTGGTGGCC ATGACCGTCA CCTGCACGTT GGCTCTGGGA
ACGGCTTGGG CCGACAAACT GGAAGAAATC AAAGAACGCG GCTACATGGT TGCCGGCGTC
AAAGACGCTG TGGTCCCCTT CGGCTATGTG GACAAGGATA CCAACAATAT CGTTGGCTTT
GATGTCGACA TCTGCAAAGA ACTCGCTGAC AAACTCGGTG TGGACCTGCG ACTCAAGCCC
GTGACCTCCA GCACCCGGAT CCCCATGTTG GCCCAGGGCT CGGTCGACAT CCTGGCTGCA
ACCATGACCC ACAAATTCAG CCGGGAAGAT TCCATCGACT TCTCCACGAC CTATTTCATG
ACCGGCCAGA AACTCCTGGT CAAAAAAGAC TCCGACATTT CCTCCACTGC AGACCTGGCC
GGCAAGAAAG TCGGGACCGC CAAGGGATCG ACTTCGGAAA AGAACATCAA AGAGGCTCAG
CCCGAGAGCC GCGTCCTGTC CTTTGAGGGC TATCCGCAGG CATTTCTCGC TCTGCGTCAG
GGCAAGGTCA AAGCCGTGAC CACGGATGCG ACCATTCTGC TTGGATTGAA AAACTCCGCA
CCGGACCCGG ACAAGTACGC CATCGTCGGT GAGTACATCT CCGATGAACC CTATGGTCTC
GGCGTGCCTG AAAACGAATC CAACTTCCGG GACTTCGTGA ACCGTTCCCT GGCTAAAATG
TGGGTCAACG GAGAATACCA GGAAATCTAT AGCAAATGGT TCGGTAAAGA CACCAACTAC
CACCTGCCCC TGGATTGGGA TATGCAGCCC TGGCCGTTCT AG
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| Protein sequence | MRKMVLLLVA MTVTCTLALG TAWADKLEEI KERGYMVAGV KDAVVPFGYV DKDTNNIVGF
DVDICKELAD KLGVDLRLKP VTSSTRIPML AQGSVDILAA TMTHKFSRED SIDFSTTYFM
TGQKLLVKKD SDISSTADLA GKKVGTAKGS TSEKNIKEAQ PESRVLSFEG YPQAFLALRQ
GKVKAVTTDA TILLGLKNSA PDPDKYAIVG EYISDEPYGL GVPENESNFR DFVNRSLAKM
WVNGEYQEIY SKWFGKDTNY HLPLDWDMQP WPF
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