| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0973 |
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| Symbol | |
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| ID | 1219782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1020995 |
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| End bp | 1021906 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637237336 |
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| Product | amino-acid-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_519094 |
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| Protein GI | 17545692 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00938185 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.751269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGTTCG TCTCACGCAC GCTGCCTGCG GCCGCGCTGC TTTGCACTTC GCTGTCCATC
TTTTCGCCGG GCACCGCCCT GGCATCCACC ACACCCGTCC TCGACCGCAT CCGCGACACC
GGCATCGTCC GCATCGCGCA TCGCGAAAGC GCCTCGCCCT TCTCGTACTA CGACGCCGAC
AAAAAACCCG TCGGCTACGC AGTGGACCTG TGCCTGCGCG TGGTCGACAA GCTGCGCACG
GAGCTCAAGC GGCCCGACCT GAAGGTGCAG TACGTCCTGG TCACGCCATC GACCCGCATC
CCCACGATCC AGGAGGGCAA GGCCGATCTC GAATGCAGCA CGACCACCAA CAACCGCGAG
CGCCGCGAAC AGGTCGCGTT CACCATTCCG CACTACATCG CGGGCATCCG CATGCTGGTC
AAGACCGCGT CGGGCATCCA CAGGTGGGAC GACCTGCGCG ACAAGACCGT GGTCTCGACC
AAGGGCACCA CCAGCGTCGC CGAGCTGCGC AAGATGAACG ACTCGCGCGT GCTGCGTATC
AAGTTCGAGG AAGTGAAGGA GCATGCCGAG GCCTTCGCCA TGGTGGAATC CGGCAAGGCC
GATGCGTTCG TCATGGATGA CGTGCAGCTC TACAGCTTCC GCGCCAACGC GAAGCATCCG
CAGGACTACA CCGTGGTGGG CGACATGATG ACGGTCGAGC CCTACGCGAT CATGCTCAGC
AAGAGCGATC CCGACTTCAA GCGCATGGTC GACCGAGCCA TGACCGCCAT CATCCTCGAC
TACGACGCCG AGAAGCTCTA CAAGAAGTGG TTCCAGCAAC CGATCCCGCC CAACAGCGCG
AAGCTCGACA TGCCGATGAA CTTCCTGCTG CGGGATTCGT TCAAGTACCC GAGCGACAAG
GTCGCCGACT GA
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| Protein sequence | MLFVSRTLPA AALLCTSLSI FSPGTALAST TPVLDRIRDT GIVRIAHRES ASPFSYYDAD
KKPVGYAVDL CLRVVDKLRT ELKRPDLKVQ YVLVTPSTRI PTIQEGKADL ECSTTTNNRE
RREQVAFTIP HYIAGIRMLV KTASGIHRWD DLRDKTVVST KGTTSVAELR KMNDSRVLRI
KFEEVKEHAE AFAMVESGKA DAFVMDDVQL YSFRANAKHP QDYTVVGDMM TVEPYAIMLS
KSDPDFKRMV DRAMTAIILD YDAEKLYKKW FQQPIPPNSA KLDMPMNFLL RDSFKYPSDK
VAD
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