Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_0564 |
Symbol | |
ID | 4308705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 633236 |
End bp | 634129 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638148358 |
Product | extracellular solute-binding protein |
Protein accession | YP_772457 |
Protein GI | 115350618 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATACC ACAAGGCAGT CCTGATGGTC GCGGCGCTGT GCGCGTTCGC GAGCGGCGCG CATGCACAGG AGACCGGCAC GCTGAAGAAG ATCAAGGACA CGGGCGTGAT CGCGCTGGGG CACCGCGAAT CGTCGATCCC GTTCTCCTAC TATGACCAGA ACCAGCAGGT CGTCGGCTAT TCGCGCGAAT TCCAGATGAA GGTCGTGGAC GCGGTGAAGA AGAAGCTGAA CCTGCCGAAC CTGCAGGTCA AGAACATCCC GGTCACGTCG CAGAACCGCA TCCCGCTCGT GCAGAACGGC ACGGTCGACA TCGAGTGCGG CTCGACGACC AACAACACCG AGCGTCAGCA GCAAGCCGCG TTCTCCGACA CGATCTTCGT GATCGGCACG CGCCTGATGA CGAAGAAGGA TTCGGGCGTG AAGGACTTCG CCGACCTGAA GGGCAAGACG GTCGTGACCA CCGCCGGCAC GACGTCCGAG CGCCTGCTGC GCAAGATGAA CAACGACAAG CAGCTCGGCA TGAACATCAT CAGCGCGAAG GATCACGGCG ACTCGTTCAA CACGCTCGAG TCGGGCCGCG CGGTCGCGTT CATGATGGAC GACGCGCTGC TCGCGGGCGA GCGCGCGAAG GCCAAGCAGC CGGGCGAGTG GGTGATCGTC GGCACGCCGC AGTCGGAAGA GGCTTACGGC TGCATGATGC GCAAGGGCGA TACCGACTTC AAGAAGGTGG TCGACGACGC GATCTCGCAA GTCGAGAAGT CGGGCGAAGC CGCGAAGATC TACGCGAAGT GGTTCGAGAG CCCGATTCCG CCGAAGGGGC TGAACCTGAA CTTCCCGCTG TCCGATTCGA TGAAGAAGCT GTACGCGAAC CCGAACGACA AGGCGCTCGA CTGA
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Protein sequence | MKYHKAVLMV AALCAFASGA HAQETGTLKK IKDTGVIALG HRESSIPFSY YDQNQQVVGY SREFQMKVVD AVKKKLNLPN LQVKNIPVTS QNRIPLVQNG TVDIECGSTT NNTERQQQAA FSDTIFVIGT RLMTKKDSGV KDFADLKGKT VVTTAGTTSE RLLRKMNNDK QLGMNIISAK DHGDSFNTLE SGRAVAFMMD DALLAGERAK AKQPGEWVIV GTPQSEEAYG CMMRKGDTDF KKVVDDAISQ VEKSGEAAKI YAKWFESPIP PKGLNLNFPL SDSMKKLYAN PNDKALD
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