| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5946 |
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| Symbol | |
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| ID | 6182193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010557 |
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| Strand | - |
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| Start bp | 497096 |
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| End bp | 498037 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641689077 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001815936 |
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| Protein GI | 172065224 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.310402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC AGCGATTCTG GCGCGCGCTC GCGCTCGCAG GCCTGCTTGC CGCGGGCGCA
ACCGCGCGCG CGGACGATGC GCCCACCCCG CCGCCGCGCG TCGAGCCGCT CGCGCCGGCC
CAACTGACCG GCACGCTCGC GAAGGTACGC AGCAGCGGTA CGATCGCGCT CGGCTATCGC
GACGCGTCGA TACCGTTCTC GTACCTGAAC GCGCGCAACC AGCCGATCGG TTATTCGATC
GAGCTCTGCA AGGCGCTCGT GTCGTCGATC GAGGATGCGG TCAACAAGAG CCTGACGATC
CGCTGGGTGC CGGTCACGTC CGACAACCGC ATCGACGCGG TGGTCAGCGG CAACGTCGAT
CTGGAGTGCG GCTCCACGAC GAGCAACCTG GAGCGCCAGC AGCGCGTGGC GTTCTCGCCG
ATCATCTTCG TGGCCGGCAC GAAGGTGATG GTGAAGCGAG GCTCGCCGAT CCGCTCGTTC
CGCGATCTGG CGGGCAAGAA GGTCGCGGTA ACGGCCGGCA CGACCAACGA GAAGGCGCTG
CGCGACCTGG ACGCACGGTT CAAGCTCGGG ATCCAGTTGC AGGTGGTGCC GGATCATGCG
CAGGGCTTCG CGCTGGTCGC GAACGGCCGC GCCGATGCGT TCGCGACGGA CGACGTGCTG
CTGTACGGCC TGATCGCCGA GAATGCGGGC AAGGGCGGCC AGTACGATGT GGTCGGCGAT
TACCTGTCAT ACGACCCGTA CGGCATCATG TTCCGCAAGG ACGATCCGCA GCTCGCACAG
GTCGTGAAGA GCACATTCGA GGAACTGGCC GTCGACGGCG AGATCACGCG TCAGTACAAG
CGCTGGTTCC TGCGTCCGCT TCCGTCGGGC GTGAGCCTGA ACCTGCCGAT GAGCCAGCAA
CTGAAGACCA TCATCGACGC GATCGGCGTC AAGAGCGATT GA
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| Protein sequence | MKMQRFWRAL ALAGLLAAGA TARADDAPTP PPRVEPLAPA QLTGTLAKVR SSGTIALGYR
DASIPFSYLN ARNQPIGYSI ELCKALVSSI EDAVNKSLTI RWVPVTSDNR IDAVVSGNVD
LECGSTTSNL ERQQRVAFSP IIFVAGTKVM VKRGSPIRSF RDLAGKKVAV TAGTTNEKAL
RDLDARFKLG IQLQVVPDHA QGFALVANGR ADAFATDDVL LYGLIAENAG KGGQYDVVGD
YLSYDPYGIM FRKDDPQLAQ VVKSTFEELA VDGEITRQYK RWFLRPLPSG VSLNLPMSQQ
LKTIIDAIGV KSD
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