Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2087 |
Symbol | |
ID | 3835514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2415762 |
End bp | 2416679 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637826189 |
Product | extracellular solute-binding protein |
Protein accession | YP_427174 |
Protein GI | 83593422 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGTTCA AACACGTTGT GGCCCTGGCG GCCGCCTTCG GCCTGCTGGC CGGCTCGGCC AGCGCCGAGG AACTGACTGG AACGCTGAAG AAGATCAAGG AAACCGGTGA AATCGCCATC GGTCACCGGG ATTCCTCGAT CCCCTTCTCC TATCTCGACG ATAATCAGAA GCCGATCGGC TATGCCATGG ACATCTGCGC CCATGTCGTC GAGGCGGTGA AGGCCGAACT GAAGCTCGAT ACCCTGGCCG TCAAGCTGAC GCCGGTGACC TCGGCCACCC GTATTCCGCT GATCGCCAAT GGCACCGTCG ATCTGGAATG CGGCTCGACC ACCAACAACC TCGATCGCCA GCAGCAGGCC AGCTTCACCA ACAGCCATTT CCTGACCGCC AGCCGCTTTG TTTCCAAGAA GACCAGTAAT CTCAAGTCGA TCGACGACCT GAAGGGCAAG ACCGTGGTGT CGACCGCCGG CACCACCAAC ATCAAGCAGG TCAACGAGCT CAACACCGCC CGCGGGCTCG GCATCAAGAT CATCCCGGCC AAGGATCACG CCGAGGGCTT CTTGATGGTC GAAACCGATC GCGCCGTCGC CTTCGCCATG GACGACATCC TGCTCGCCAC CCTGGTCGCC GGATCGAAGA CCCCGTCGGC CTATGTCATC TCGGAAGACG CCTTCTCGCT GCCCGAGCCC TACGGCATCA TGCTGCGCAA GGATGACCCC GCCTTCAAGG CGGTGGTCGA TCGGGCCACG GCGGCGCTTT ACACCAGCCC CGAAGGCCCC AAGCTGTTTG CCAAGTGGTT TGAGAACCCC ATTCCGCCCA AGGGCCTCAA CGTCAACCTG CCTTTGGCCG GCGCCATGAA GAACGCCCTC GCCCATCCCA GCGATTCGGC CGACCCCAAG GCCTATCTGG CCCCGTAA
|
Protein sequence | MSFKHVVALA AAFGLLAGSA SAEELTGTLK KIKETGEIAI GHRDSSIPFS YLDDNQKPIG YAMDICAHVV EAVKAELKLD TLAVKLTPVT SATRIPLIAN GTVDLECGST TNNLDRQQQA SFTNSHFLTA SRFVSKKTSN LKSIDDLKGK TVVSTAGTTN IKQVNELNTA RGLGIKIIPA KDHAEGFLMV ETDRAVAFAM DDILLATLVA GSKTPSAYVI SEDAFSLPEP YGIMLRKDDP AFKAVVDRAT AALYTSPEGP KLFAKWFENP IPPKGLNVNL PLAGAMKNAL AHPSDSADPK AYLAP
|
| |