Gene Rru_A2087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2087 
Symbol 
ID3835514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2415762 
End bp2416679 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content62% 
IMG OID637826189 
Productextracellular solute-binding protein 
Protein accessionYP_427174 
Protein GI83593422 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTCA AACACGTTGT GGCCCTGGCG GCCGCCTTCG GCCTGCTGGC CGGCTCGGCC 
AGCGCCGAGG AACTGACTGG AACGCTGAAG AAGATCAAGG AAACCGGTGA AATCGCCATC
GGTCACCGGG ATTCCTCGAT CCCCTTCTCC TATCTCGACG ATAATCAGAA GCCGATCGGC
TATGCCATGG ACATCTGCGC CCATGTCGTC GAGGCGGTGA AGGCCGAACT GAAGCTCGAT
ACCCTGGCCG TCAAGCTGAC GCCGGTGACC TCGGCCACCC GTATTCCGCT GATCGCCAAT
GGCACCGTCG ATCTGGAATG CGGCTCGACC ACCAACAACC TCGATCGCCA GCAGCAGGCC
AGCTTCACCA ACAGCCATTT CCTGACCGCC AGCCGCTTTG TTTCCAAGAA GACCAGTAAT
CTCAAGTCGA TCGACGACCT GAAGGGCAAG ACCGTGGTGT CGACCGCCGG CACCACCAAC
ATCAAGCAGG TCAACGAGCT CAACACCGCC CGCGGGCTCG GCATCAAGAT CATCCCGGCC
AAGGATCACG CCGAGGGCTT CTTGATGGTC GAAACCGATC GCGCCGTCGC CTTCGCCATG
GACGACATCC TGCTCGCCAC CCTGGTCGCC GGATCGAAGA CCCCGTCGGC CTATGTCATC
TCGGAAGACG CCTTCTCGCT GCCCGAGCCC TACGGCATCA TGCTGCGCAA GGATGACCCC
GCCTTCAAGG CGGTGGTCGA TCGGGCCACG GCGGCGCTTT ACACCAGCCC CGAAGGCCCC
AAGCTGTTTG CCAAGTGGTT TGAGAACCCC ATTCCGCCCA AGGGCCTCAA CGTCAACCTG
CCTTTGGCCG GCGCCATGAA GAACGCCCTC GCCCATCCCA GCGATTCGGC CGACCCCAAG
GCCTATCTGG CCCCGTAA
 
Protein sequence
MSFKHVVALA AAFGLLAGSA SAEELTGTLK KIKETGEIAI GHRDSSIPFS YLDDNQKPIG 
YAMDICAHVV EAVKAELKLD TLAVKLTPVT SATRIPLIAN GTVDLECGST TNNLDRQQQA
SFTNSHFLTA SRFVSKKTSN LKSIDDLKGK TVVSTAGTTN IKQVNELNTA RGLGIKIIPA
KDHAEGFLMV ETDRAVAFAM DDILLATLVA GSKTPSAYVI SEDAFSLPEP YGIMLRKDDP
AFKAVVDRAT AALYTSPEGP KLFAKWFENP IPPKGLNVNL PLAGAMKNAL AHPSDSADPK
AYLAP