| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4583 |
|---|
| Symbol | gltI |
|---|
| ID | 4041444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 1200955 |
|---|
| End bp | 1201869 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637980004 |
|---|
| Product | glutamate/aspartate ABC transporter periplasmic solute-binding protein |
|---|
| Protein accession | YP_586714 |
|---|
| Protein GI | 94313505 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.8955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00199709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCGA TTGTGTCTGT TTCGTCTCTT CAACGCCTGC TGGCCGGCAT CGCCCTGGCT
GCCGCGCTGG TGCCGGCCGC CCACGCCCAG AATCCCCAGA GCCCGGTCCT TGATCGCATT
CGCGACAGCG GAACGATCAC GCTTGGCTAC CGCGAATCCG CCCTGCCGTT CTCGTTCGGC
GACGACAAGG GACAGCCGGC CGGCTATGCC GTCGACCTCT GCCTGCGCGT GGCCGAAGCC
GCCAAGGAGA AGCTCGGGCT CAAGACCATC AAGGTGCGCT GGCTGCCGCT GACGCCGCAG
AACCGGGTTC CGGCCGTGGT CAACGGCCTG GTCGATCTCG ACTGCGCACC GAATACCAAT
ACGCTGGAGC GCCAGAAGCA GGTAGCGTTC AGCGTGTCGC ACTATGTGTC GACCGTCCGC
ATGCTCGTGC GCGCCGACTC GGGTATCAAG TCGTTCGATG ACCTGCGTGG CAAGACCGTG
GTGACCAGCG CCGGCTCCAC CGGTGACCGC CATGTGCGCC GCCTGAAGGC CGAGTACGGC
TACCGCGATG TCTACGCGAA GGACCACGGC GAATCGTTCC TGCTGCTGGA AACCGGCCGC
GCGCAAGCGT TCGTCATGGA TGACGTGCTG CTGGCCGGCC TGCGCGCGAA GTCCAAGGAT
CCGTCGCAGT ATGTGATCGT CGGCCCGGCG CTGTCGGTCG AACAGAACGC GTTGATGCTG
TCGAAAGCCG ATCCGGAATG GAAGCGTCTG GTCGACCAGA CGCTGGCCAA GACCTTCACC
AGCCCGGACG TCGCGGCCAT GCAGAAGCGC TGGTTCCAGC AGCCGATCGG CACGCGCGGC
ACCAATCTGG CGCTGGCCCC GTCGACGGAA GTCCTGCAGG CGTGGAAGCA CCCCTCCGAC
GTTGTGACGG AATAA
|
|---|
| Protein sequence | MPSIVSVSSL QRLLAGIALA AALVPAAHAQ NPQSPVLDRI RDSGTITLGY RESALPFSFG
DDKGQPAGYA VDLCLRVAEA AKEKLGLKTI KVRWLPLTPQ NRVPAVVNGL VDLDCAPNTN
TLERQKQVAF SVSHYVSTVR MLVRADSGIK SFDDLRGKTV VTSAGSTGDR HVRRLKAEYG
YRDVYAKDHG ESFLLLETGR AQAFVMDDVL LAGLRAKSKD PSQYVIVGPA LSVEQNALML
SKADPEWKRL VDQTLAKTFT SPDVAAMQKR WFQQPIGTRG TNLALAPSTE VLQAWKHPSD
VVTE
|
|---|
| |