Gene Rpic_3666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3666 
Symbol 
ID6287403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3838993 
End bp3839898 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content61% 
IMG OID642627249 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001901216 
Protein GI187930729 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGA CCACCCGCTG TATCCGAACC TTCCCGCTGG CACTGGCCAG CCTACTCGCG 
ATCGGCGCGC ACGCGCAGGC GCTGGACGGC ACGCTGAAGA AAATCCAGGA CAGCAACACG
ATCCTGATCG GCGTGCGCGA ATCGTCGATT CCGTTTTCTT ACCGCGACAG CAAGAACGAG
ATCGTCGGTT TCTCGGCAGA CCTCTGCTCG CGCGTGATCG ACGCCGTCAG GAAGAAGACG
GGCAAGCCCA ACCTGGACAT CAAGCACATT CCGGTGACGT CGCAGAACCG GACATCGCTG
GTGCAGAACG GCTCGGTGGA CCTCGAGTGC GGCGTGACCA CGCACCTGAA ATCACGCGAG
CAGCAGACGG CGTTTTCGAC CACCTTCTTC ATCGCCGGCA CGCGCCTGCT GACCAACGTG
AAATCGGGCG TAAAGGATTT CCCGGACCTG GCGGGCAAGT CGGTGATCAC CAACGCGGGC
ACGACGTCGG AACGCATCCT GCGCAGGATG AACGACGAGA AGAAGATGAA CATGAACGTG
ATCAGCGGCA AGGATTACGG TGAATCGTTC CTCACGCTGC AGAGCGGCCG CGTGGCGGCG
TTCATGATGG ATGACGTGCT GCTGGCCGGC GCACGCACGC TGGCGCAGAA GCCCGACGAC
TGGGTCGTGA CCGGCACGCC GCAGTCGTTC GAAGCCTACG GCTTCATGCT GCGCCGCGAC
GATCCTCAGT TCAAGAAGCT GGTGGACGAC ACGATGGCCG GCGTGATGAA AAGCGGCGAG
GTCAAAGCAC TGTACGCCAA GTGGTTCGAG AAGCCGGTAC CGCCCAAGAA CCTGAACTTC
AATTTCCCGA TGAACGATCA GTTGAAGGCG CTGTACGCCA ACCCGAACGA CACGCCGTTC
GAGTGA
 
Protein sequence
MRLTTRCIRT FPLALASLLA IGAHAQALDG TLKKIQDSNT ILIGVRESSI PFSYRDSKNE 
IVGFSADLCS RVIDAVRKKT GKPNLDIKHI PVTSQNRTSL VQNGSVDLEC GVTTHLKSRE
QQTAFSTTFF IAGTRLLTNV KSGVKDFPDL AGKSVITNAG TTSERILRRM NDEKKMNMNV
ISGKDYGESF LTLQSGRVAA FMMDDVLLAG ARTLAQKPDD WVVTGTPQSF EAYGFMLRRD
DPQFKKLVDD TMAGVMKSGE VKALYAKWFE KPVPPKNLNF NFPMNDQLKA LYANPNDTPF
E