Gene Spro_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1214 
Symbol 
ID5603067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1330432 
End bp1331328 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content52% 
IMG OID640936735 
Productglutamate and aspartate transporter subunit 
Protein accessionYP_001477446 
Protein GI157369457 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.839124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.912461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATGC GTAAATTGGC GTTATCGTTA CTGCTGATCG GTACGGCGGC TAACGTAGCC 
CATGCGGAAG AACTGACCGG TACGCTGAAG AAAATCAAAG ACAACGGCGT GATCGTTGTC
GGCCACCGCG AATCGTCAGT GCCGTTCTCC TACTACGACA ACCAGCAGAA AGTGGTGGGC
TACTCCCAGG ACTACTCCAA CCAAATCGTT GAAGCGGTTA AGAAAAAACT GAACGCCCCG
GACCTGCAGG TCAAAATGCT GCCGATCACC TCTCAGAACC GTATTCCGCT GCTGCAAAAC
GGTACCTTTG ACTTCGAGTG CGGCTCGACC ACCAATAACC TTGAGCGCCA GAAACAGGCC
GCCTTCTCCG ACACCATCTT CGTGGTCGGT ACCCGCCTGC TGGTGAAAAA AGGCTCTGAC
GTTAAAGATT TCAAAGATTT GGCTGGTAAA CCGGTCGTAG TCACCTCCGG CACCACTTCG
GAAGTGCTGC TCAATAAACT CAATGACAGC GGCAAAATGA ACATGCGCAT CATCAGCGCC
AAAGACCACG GTGATTCATT CCGCACCCTG GAAAGTGGCC GAGCAGTCGC CTTTATGATG
GATGACGCCC TGTTGGCCGG TGAACGCGCG AAAGCCAAGA AGCCGGACCA ATGGGAAATC
ATCGCAACGC CGCAGTCGAA AGAAGCCTAC GGCTGTATGC TGCGTAAAGA CGATCCTGAG
TTCAAAAAAC TGGTCGATGA CACCATCGCT CAGGCCCAGA CTTCAGGCGA AGCGGCAAAA
TGGTTTGATA AGTGGTTCAA ACAGCCAATC CCACCGAAGA ACCTCAACAT GAACTTCGAA
CTGTCAGACG ACATGAAGCA ACTGTTCAAA GAGCCTAACG ACAAAGCACT GAACTAA
 
Protein sequence
MQMRKLALSL LLIGTAANVA HAEELTGTLK KIKDNGVIVV GHRESSVPFS YYDNQQKVVG 
YSQDYSNQIV EAVKKKLNAP DLQVKMLPIT SQNRIPLLQN GTFDFECGST TNNLERQKQA
AFSDTIFVVG TRLLVKKGSD VKDFKDLAGK PVVVTSGTTS EVLLNKLNDS GKMNMRIISA
KDHGDSFRTL ESGRAVAFMM DDALLAGERA KAKKPDQWEI IATPQSKEAY GCMLRKDDPE
FKKLVDDTIA QAQTSGEAAK WFDKWFKQPI PPKNLNMNFE LSDDMKQLFK EPNDKALN