| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2089 |
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| Symbol | |
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| ID | 6177145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2334971 |
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| End bp | 2335891 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641681857 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001808786 |
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| Protein GI | 172061134 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.881502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC CGCCCCGGTT GACCGCCCTT TTCGGCCGCA GCCTGCTCGT CGCCGCCTGC
GCGCTCGCGT GCGGCACGGC GCTCGCCGCC CAGCCGCTGT CCGGCACGCT CGAGAAGATC
CGGCAGGCCG GCCTGATCTC GATCGGCCAC CGCGAAACGT CGGTGCCGTT CTCCTACGTC
GACGCGAGCG GCAAGGTGAT CGGCTTCTCG CAGGACCTGT GCGATCGCGT GATCGCCACC
GTGAAGGCGC GCACCGGCAA GCCCGACCTG CAGGTGCGCT TCATCCCGGT CACGTCGCAG
AACCGCATCC CGCTCGTGCA GAACGGCACC GTCGATCTCG AATGCGGGGT GACCACCAAT
CTCGCCGCGC GCCACGCGCA GGTCGCGTTC TCGACCACCT TCTTCGTCGC GACGACGCGC
CTGCTCACGC GCACGAGCTC GGGCATCCGC GACTTCCCCG ATCTCGCCGG CAAGACGGTC
GTGACGAATC AGGGCACGAC GTCCGAACGC CTGCTGCGCA AGATGAACGA GGAAAAGAAG
ATGAACATGC AGATCATCAG CGCGAAGGAC TACGGCGAAG GACGCCTCAC GCTCGAATCG
GGCCGCGCGG CCGCCTACAT GATGGACGAC GTGCTGCTCG CCGGTGTGCG CCAGCTCGCG
GCGAAACCGG CCGACTGGGC GATCGTCGGC ACGCCGCAGT CGTCGGAAGC GTACGGATTC
ATGCTGCGCA AGGACGATCC GCAGTTCAAG GCGCTCGTCG ACGGCGTGCT CGTGCAGCTG
ATGAAGAGCG GCGAGATCAA TGCGCTGTAC GACAAGTGGT TCATGAAGCC GGTGCCGCCG
AAGGGGCTCG CGTTCGACTT CCCGATGAGC GACGTGATCA GGACGCGCTA CGCGGCGCCG
AACGATGCGC CGCTCGAGTG A
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| Protein sequence | MTIPPRLTAL FGRSLLVAAC ALACGTALAA QPLSGTLEKI RQAGLISIGH RETSVPFSYV
DASGKVIGFS QDLCDRVIAT VKARTGKPDL QVRFIPVTSQ NRIPLVQNGT VDLECGVTTN
LAARHAQVAF STTFFVATTR LLTRTSSGIR DFPDLAGKTV VTNQGTTSER LLRKMNEEKK
MNMQIISAKD YGEGRLTLES GRAAAYMMDD VLLAGVRQLA AKPADWAIVG TPQSSEAYGF
MLRKDDPQFK ALVDGVLVQL MKSGEINALY DKWFMKPVPP KGLAFDFPMS DVIRTRYAAP
NDAPLE
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