Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0826 |
Symbol | |
ID | 6286744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 870296 |
End bp | 871204 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642624390 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_001898408 |
Protein GI | 187927921 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.296945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTCT TCACGCGCGC GCTGCCGGCT GCAGCGCTGC TCTTCGCTTC GCTGTCCAGT TTGCCGGGCC CTGTCCTGGC CTCCTCCACG CCGGTGCTCG ACCGCATCCG CGACACCGGC ACCGTCCGCG TCGCCTACCG CGAAAGCTCC GTGCCCTTCT CGTTCTACGA CGCCGATAAA AAGCCCGTCG GCTATGCCGT CGATCTGTGC CTGCGCGTGG TCGACAAGCT GCGCACGGAC CTCAAGCGGC CCGATCTGAA AGTGCAATAT GTGCTGGTCA CGCCCTCGAC GCGGATGCCG GCCATCGCCG ATGGCAAAGC CGACCTCGAA TGCGGCTCGA CCACCAACAA CCGCGAACGC CGCGAGAAAG TGGCCTTCAC GATTCCGCAC TACATCGCGG GCATCCGCAT GATCGTCAAG ACGTCGTCGG GCATCCGCAG GTGGGATGAC CTGCGCGGCA AGACCGTCGT CACCACCAAA GGCACCACCA GCGTGGCGGA GCTGCGCAAG ATGAACGACG TGCGCGTGCT GAACATGAAC TTCCTCGAAG CCAAGGACCA CGCTGAATCC TTCGCGATGG TCGAAACCGG CAAGGCCGAC GCTTTTGCAA TGGACGACGT GCTGCTCTAC GGCTTCCGCG CCAACACCAA GACCCCGGGC GACTACGCCG TCGTCGGTGA CATGCTGACG GTCGAGCCCT ACGCGATCAT GCTGAGCAAG GACGACACCG AGTTCAAGCG CTTGGTTGAT CGCGCGATGA CCAACATCAT CCTCGACTAC GACGCCGAGA AGCTCTACAA GAAGTGGTTC CAGCAACCGA TTCCGCCGCA CAGCGCAAAG CTCGATATCC CGATGAGCTT CCTGCTGCGC GACTCGTTCA AGTACCCGAG CGACAAAGTC GCCGATTGA
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Protein sequence | MPFFTRALPA AALLFASLSS LPGPVLASST PVLDRIRDTG TVRVAYRESS VPFSFYDADK KPVGYAVDLC LRVVDKLRTD LKRPDLKVQY VLVTPSTRMP AIADGKADLE CGSTTNNRER REKVAFTIPH YIAGIRMIVK TSSGIRRWDD LRGKTVVTTK GTTSVAELRK MNDVRVLNMN FLEAKDHAES FAMVETGKAD AFAMDDVLLY GFRANTKTPG DYAVVGDMLT VEPYAIMLSK DDTEFKRLVD RAMTNIILDY DAEKLYKKWF QQPIPPHSAK LDIPMSFLLR DSFKYPSDKV AD
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