Gene Rpic_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0826 
Symbol 
ID6286744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp870296 
End bp871204 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID642624390 
Productextracellular solute-binding protein family 3 
Protein accessionYP_001898408 
Protein GI187927921 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.296945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCT TCACGCGCGC GCTGCCGGCT GCAGCGCTGC TCTTCGCTTC GCTGTCCAGT 
TTGCCGGGCC CTGTCCTGGC CTCCTCCACG CCGGTGCTCG ACCGCATCCG CGACACCGGC
ACCGTCCGCG TCGCCTACCG CGAAAGCTCC GTGCCCTTCT CGTTCTACGA CGCCGATAAA
AAGCCCGTCG GCTATGCCGT CGATCTGTGC CTGCGCGTGG TCGACAAGCT GCGCACGGAC
CTCAAGCGGC CCGATCTGAA AGTGCAATAT GTGCTGGTCA CGCCCTCGAC GCGGATGCCG
GCCATCGCCG ATGGCAAAGC CGACCTCGAA TGCGGCTCGA CCACCAACAA CCGCGAACGC
CGCGAGAAAG TGGCCTTCAC GATTCCGCAC TACATCGCGG GCATCCGCAT GATCGTCAAG
ACGTCGTCGG GCATCCGCAG GTGGGATGAC CTGCGCGGCA AGACCGTCGT CACCACCAAA
GGCACCACCA GCGTGGCGGA GCTGCGCAAG ATGAACGACG TGCGCGTGCT GAACATGAAC
TTCCTCGAAG CCAAGGACCA CGCTGAATCC TTCGCGATGG TCGAAACCGG CAAGGCCGAC
GCTTTTGCAA TGGACGACGT GCTGCTCTAC GGCTTCCGCG CCAACACCAA GACCCCGGGC
GACTACGCCG TCGTCGGTGA CATGCTGACG GTCGAGCCCT ACGCGATCAT GCTGAGCAAG
GACGACACCG AGTTCAAGCG CTTGGTTGAT CGCGCGATGA CCAACATCAT CCTCGACTAC
GACGCCGAGA AGCTCTACAA GAAGTGGTTC CAGCAACCGA TTCCGCCGCA CAGCGCAAAG
CTCGATATCC CGATGAGCTT CCTGCTGCGC GACTCGTTCA AGTACCCGAG CGACAAAGTC
GCCGATTGA
 
Protein sequence
MPFFTRALPA AALLFASLSS LPGPVLASST PVLDRIRDTG TVRVAYRESS VPFSFYDADK 
KPVGYAVDLC LRVVDKLRTD LKRPDLKVQY VLVTPSTRMP AIADGKADLE CGSTTNNRER
REKVAFTIPH YIAGIRMIVK TSSGIRRWDD LRGKTVVTTK GTTSVAELRK MNDVRVLNMN
FLEAKDHAES FAMVETGKAD AFAMDDVLLY GFRANTKTPG DYAVVGDMLT VEPYAIMLSK
DDTEFKRLVD RAMTNIILDY DAEKLYKKWF QQPIPPHSAK LDIPMSFLLR DSFKYPSDKV
AD