| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2073 |
|---|
| Symbol | |
|---|
| ID | 8019734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | - |
|---|
| Start bp | 2209030 |
|---|
| End bp | 2209953 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644830859 |
|---|
| Product | extracellular solute-binding protein family 3 |
|---|
| Protein accession | YP_002982024 |
|---|
| Protein GI | 241663664 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00884653 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCT TGCAATCGAC CGAACGGATT CTGTGTGGCC TGACGCTGGC TGCGGCCGGT
GCGTTGGCCG TGCTGTCGAC CGGTGCGCAG GCGCAGTCGA ACGACACGCT GGCCAAGATC
AAGCAATCGG GCGTGATCTC GGTGGGCTAT CGCGAGTCGT CGATTCCGTT CTCGTACCAG
GCTGACGCGA ACACCATCAC CGGCTATTCG CAAGAAATCT CCAACATGAT CGTTGCCGGC
GTGGAAAAGG CAGTGGGCAA GAAGCTGCAG GTCAAGCTCA CGCCGATCAC GTCGCAGAAC
CGCATTTCGC TGCTGCAGAA CGGGACGATC GATTTCGAGT GCGGCTCCAC CACCAACAAC
CTCGAGCGCC AGAAGCAGGT CGCGTTCTCG AACAACATCT TCATCTACGG CATGTTGATG
CTGGTGAAGA AGGACTCGGG CATCAAGGAC TTTCCCGACC TGAAGGGCAA GACCGTGGTG
ACCACCGCCG GCACCACCGA AGACCGCATC CTGCAGAAGA TGAACGGTGA AGCCAAGGAC
GCCGACAAGA TGAACCTGAT CCTCGCCAAG GATCACGGCC AGGCGTTCCT GACGCTGGAA
TCGGGCCGCG CCGTGGCGTT CGTGATGGAC GAACCGCTGC TGTACGGCGA GCGCACCAAG
GCCAAGAACC AGGCCGACTG GGTGGTCACC GGCACGCCGC TGCAGACCGA AACCTACGCC
TGCATGATGC GCAAGGACGA TCCGGCGTTC AAGAAAGTGG CCGACGACGT GATTGCCGAT
CTGATGAAAT CGGGCAAGGC GAACGACTTG TACAAGAAGT GGTTCCTGTC GCCGATTCCG
CCGAAGGGCC TGAACCTGAA CTACCCGATG ACGGCCGGCA TGAAGGACTT GTACGCGCAC
CCGAACGACA AGGCCATTCA GTAA
|
|---|
| Protein sequence | MKTLQSTERI LCGLTLAAAG ALAVLSTGAQ AQSNDTLAKI KQSGVISVGY RESSIPFSYQ
ADANTITGYS QEISNMIVAG VEKAVGKKLQ VKLTPITSQN RISLLQNGTI DFECGSTTNN
LERQKQVAFS NNIFIYGMLM LVKKDSGIKD FPDLKGKTVV TTAGTTEDRI LQKMNGEAKD
ADKMNLILAK DHGQAFLTLE SGRAVAFVMD EPLLYGERTK AKNQADWVVT GTPLQTETYA
CMMRKDDPAF KKVADDVIAD LMKSGKANDL YKKWFLSPIP PKGLNLNYPM TAGMKDLYAH
PNDKAIQ
|
|---|
| |