Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0608 |
Symbol | |
ID | 4674656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 641047 |
End bp | 641937 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639837734 |
Product | extracellular solute-binding protein |
Protein accession | YP_984931 |
Protein GI | 121593035 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.400599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTGCA AGCAAGGATG GAAGGCGCTG GGCGCCGCGG TGGCGCTGTG CTGCGCCGTG GGCGCGCAAG CCCAAGGGGT GCTGGAGCGT GTGCGCGGCG GCGGACCGCT GGTGCTGGCG CACCGTGAAT CGTCGGTGCC GTTTTCGTAC GTGCACGAGG GCAAGCCCAT GGGCTACGCC CTGGACCTGT GCCTGCATAT CGCCGAAGTG GTGCGCAAGA AGACCGGCAT GAAGAACATG CCGGTGCAGT TGGTGCAGGT GACACCCGCC AATCGCATTG AGATGGTGAA GACCGGCAAG GCCGATATGG AATGCGGCTC CACCACCAAC AACGCCGAGC GCCGCAAGGA TGTGGCCTTC ACCATTCCGC ACTTCATCAC GGGTGCGCGC CTGCTGGTGC CCGCGGCCAG CTCGGTGACG CGCATGGAGG ATCTGGAAGG CAAGAAGCTC GTGTCCACCA AAGGCACGAC GCCCTACAAA GCGGCCGAGC AGGCCAACCG CGAACGGCTG ATGCGCATCC AGCTGGTGGA GGCGCCCGAC CATGAGGCCG CGGTGGTCAT GGTGGAGAAG GGCCAGGCCG ACGCCTTCGT GATGGACGAT GTGCTGTTGT ATGGCTTGGC GGCCAACCGC CCCGACCCCA AGGCGCTGAA GGTGGTGGGC CGCTTCGTCA CCACCGAGCC GCTGGCGATC ATGCTTGCCA AGAACGATCC CGAGTTCAAG AAGTTGGTGG ACGAGGAGAT GCGCCGCCTG ATCGTGAGCA ATGAGATCAA CGCCATCTAC GACAAGTGGT TCATGCAGCC CATTGCGCCT ACCCACCGTG CGCTGAACCT GCCCGTGAGC TACCTGCTGC GGGACTTCTG GAAATACCCT ACCGATCAGG TCCCCTTCTG A
|
Protein sequence | MNCKQGWKAL GAAVALCCAV GAQAQGVLER VRGGGPLVLA HRESSVPFSY VHEGKPMGYA LDLCLHIAEV VRKKTGMKNM PVQLVQVTPA NRIEMVKTGK ADMECGSTTN NAERRKDVAF TIPHFITGAR LLVPAASSVT RMEDLEGKKL VSTKGTTPYK AAEQANRERL MRIQLVEAPD HEAAVVMVEK GQADAFVMDD VLLYGLAANR PDPKALKVVG RFVTTEPLAI MLAKNDPEFK KLVDEEMRRL IVSNEINAIY DKWFMQPIAP THRALNLPVS YLLRDFWKYP TDQVPF
|
| |