Gene EcSMS35_0676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0676 
SymbolgltI 
ID6145549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp687495 
End bp688403 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content49% 
IMG OID641615566 
Productglutamate and aspartate transporter subunit 
Protein accessionYP_001742772 
Protein GI170680102 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTAC GTAAACCTGC CACAGCAATC CTGGCCCTGG CGCTTTCCGC AGGACTGGCA 
CAGGCAGATG ACGCCGCCCC GGCAGCAGGC AGTACGCTGG ACAAAATCGC CAAAAACGGT
GTGATTGTCG TCGGTCACCG TGAATCTTCA GTACCTTTCT CTTATTACGA CAATCAGCAA
AAAGTGGTGG GTTACTCGCA GGATTACTCC AACGCCATTG TTGAAGCAGT GAAAAAGAAA
CTCAACAAAC CGGACTTGCA GGTGAAATTG ATTCCGATCA CCTCACAAAA CCGTATTCCG
CTGCTGCAAA ACGGCACTTT CGATTTTGAA TGTGGTTCTA CCACCAACAA CGTCGAACGC
CAAAAACAGG CGGCTTTCTC CGACACTATT TTCGTGGTCG GTACGCGCCT GCTGACAAAA
AAAGGCGGCG ATATTAAAGA TTTTGCCGAT CTGAAAGACA AAGCCGTCGT AGTCACTTCC
GGCACCACCT CTGAAGTTTT GCTCAACAAA CTGAATGAAG AGCAAAAAAT GAACATGCGC
ATCATCAGCG CCAAAGATCA CGGTGACTCT TTCCGTACCC TGGAAAGCGG TCGTGCCGTT
GCCTTTATGA TGGATGATGC TCTGCTGGCT GGTGAACGTG CGAAAGCGAA GAAACCAGAC
AACTGGGAAA TCGTCGGCAA GCCGCAGTCT CAGGAAGCCT ACGGTTGCAT GTTGCGTAAA
GACGATCCGC AGTTCAAAAA GCTGATGGAT GACACTATCG CTCAGGTGCA GACCTCCGGT
GAAGCGGAAA AATGGTTTGA TAAATGGTTC AAAAACCCAA TTCCGCCGAA AAACCTGAAC
ATGAATTTCG AACTGTCGGA CGAAATGAAA GCACTGTTCA AAGAACCGAA TGACAAGGCA
CTGAACTAA
 
Protein sequence
MQLRKPATAI LALALSAGLA QADDAAPAAG STLDKIAKNG VIVVGHRESS VPFSYYDNQQ 
KVVGYSQDYS NAIVEAVKKK LNKPDLQVKL IPITSQNRIP LLQNGTFDFE CGSTTNNVER
QKQAAFSDTI FVVGTRLLTK KGGDIKDFAD LKDKAVVVTS GTTSEVLLNK LNEEQKMNMR
IISAKDHGDS FRTLESGRAV AFMMDDALLA GERAKAKKPD NWEIVGKPQS QEAYGCMLRK
DDPQFKKLMD DTIAQVQTSG EAEKWFDKWF KNPIPPKNLN MNFELSDEMK ALFKEPNDKA
LN