More than 300 homologs were found in PanDaTox collection
for query gene DvMF_1730 on replicon NC_011769
Organism: Desulfovibrio vulgaris str. 'Miyazaki F'



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011769  DvMF_1730  multi-sensor signal transduction histidine kinase  100 
 
 
507 aa  1007    Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_3465  putative PAS/PAC sensor protein  47.79 
 
 
489 aa  431  1e-119  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_2459  multi-sensor signal transduction histidine kinase  47.15 
 
 
489 aa  409  1e-113  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.854352 
 
 
-
 
NC_013173  Dbac_1507  multi-sensor signal transduction histidine kinase  35.15 
 
 
488 aa  306  8.000000000000001e-82  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.101232  n/a   
 
 
-
 
NC_008554  Sfum_0294  multi-sensor signal transduction histidine kinase  29.87 
 
 
1071 aa  142  1.9999999999999998e-32  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.565561 
 
 
-
 
NC_011769  DvMF_1419  signal transduction histidine kinase  27.75 
 
 
551 aa  130  5.0000000000000004e-29  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2643  multi-sensor signal transduction histidine kinase  25.7 
 
 
552 aa  129  1.0000000000000001e-28  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2307  PAS/PAC sensor signal transduction histidine kinase  25.42 
 
 
551 aa  129  2.0000000000000002e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2828  response regulator receiver sensor signal transduction histidine kinase  43.38 
 
 
410 aa  122  9.999999999999999e-27  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1544  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  45.24 
 
 
739 aa  118  1.9999999999999998e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.498595 
 
 
-
 
NC_008751  Dvul_2096  signal transduction histidine kinase  25.57 
 
 
526 aa  114  6e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.0713574 
 
 
-
 
NC_011769  DvMF_3074  response regulator receiver modulated metal dependent phosphohydrolase  45.52 
 
 
363 aa  112  1.0000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  43.18 
 
 
451 aa  112  1.0000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_008751  Dvul_2526  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  36.21 
 
 
715 aa  112  2.0000000000000002e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  0.263284  normal  0.0502692 
 
 
-
 
NC_011769  DvMF_0064  histidine kinase  45.9 
 
 
598 aa  110  8.000000000000001e-23  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_1682  response regulator receiver modulated serine phosphatase  38.3 
 
 
412 aa  108  2e-22  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2487  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  34.62 
 
 
735 aa  106  1e-21  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  40 
 
 
457 aa  105  2e-21  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1929  response regulator receiver protein  39.37 
 
 
394 aa  104  4e-21  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.310245 
 
 
-
 
NC_009512  Pput_3577  response regulator receiver protein  39.34 
 
 
393 aa  103  6e-21  Pseudomonas putida F1  Bacteria  decreased coverage  0.00266085  normal 
 
 
-
 
NC_007404  Tbd_0085  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  34.7 
 
 
738 aa  103  6e-21  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.127866 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  39.29 
 
 
457 aa  103  6e-21  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3849  response regulator receiver (CheY) modulated Serine phosphatase  38.76 
 
 
412 aa  103  8e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.658628 
 
 
-
 
NC_007519  Dde_1522  histidine kinase  41.6 
 
 
544 aa  103  8e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1287  multi-sensor signal transduction histidine kinase  22.76 
 
 
570 aa  103  8e-21  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1706  response regulator receiver modulated serine phosphatase  39.34 
 
 
393 aa  103  8e-21  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000168842 
 
 
-
 
NC_007519  Dde_2457  metal dependent phosphohydrolase  38.46 
 
 
358 aa  103  9e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2165  response regulator  39.34 
 
 
393 aa  103  1e-20  Pseudomonas putida KT2440  Bacteria  normal  0.0249002  normal  0.813701 
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  45.07 
 
 
461 aa  102  1e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_010622  Bphy_1145  multi-sensor signal transduction histidine kinase  27.18 
 
 
490 aa  102  1e-20  Burkholderia phymatum STM815  Bacteria  normal  0.894172  normal 
 
 
-
 
NC_011884  Cyan7425_2816  multi-sensor hybrid histidine kinase  27.44 
 
 
682 aa  102  2e-20  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.0864703 
 
 
-
 
NC_009656  PSPA7_2359  putative two-component response regulator  37.01 
 
 
394 aa  102  2e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_27940  putative two-component response regulator  37.8 
 
 
394 aa  102  2e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0532  response regulator receiver /GGDEF/PAS/PAC domain-containing protein  39.86 
 
 
715 aa  100  4e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2461  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  38.64 
 
 
581 aa  100  4e-20  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  41.35 
 
 
462 aa  100  6e-20  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_010506  Swoo_1648  response regulator receiver protein  37.21 
 
 
367 aa  100  6e-20  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.0057956  normal 
 
 
-
 
NC_007650  BTH_II1009  sensory box histidine kinase/response regulator  25.88 
 
 
463 aa  99.4  1e-19  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0548  two component, sigma54 specific, transcriptional regulator, Fis family  40.91 
 
 
452 aa  99.4  1e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.902927  normal 
 
 
-
 
NC_011146  Gbem_0283  two component, sigma54 specific, transcriptional regulator, Fis family  36.3 
 
 
456 aa  99  2e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  42.62 
 
 
456 aa  99  2e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_004578  PSPTO_2117  response regulator  37.7 
 
 
394 aa  98.6  2e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0129975  n/a   
 
 
-
 
NC_008751  Dvul_1875  response regulator receiver modulated metal dependent phosphohydrolase  32.97 
 
 
361 aa  99  2e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  36.03 
 
 
456 aa  99  2e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0913  response regulator receiver sensor hybrid histidine kinase  39.52 
 
 
544 aa  99  2e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3140  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  34.59 
 
 
754 aa  99  2e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1912  response regulator receiver:stage II sporulation E  37.7 
 
 
394 aa  98.6  3e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.432168  hitchhiker  0.00180426 
 
 
-
 
NC_008554  Sfum_0828  multi-sensor signal transduction histidine kinase  23.24 
 
 
567 aa  98.6  3e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0268  two component, sigma54 specific, transcriptional regulator, Fis family  36.3 
 
 
456 aa  97.8  4e-19  Geobacter sp. M21  Bacteria  n/a    normal  0.0540037 
 
 
-
 
NC_007519  Dde_3003  two component Fis family transcriptional regulator  40.3 
 
 
465 aa  97.4  5e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0697126  n/a   
 
 
-
 
NC_011060  Ppha_1319  two component, sigma54 specific, transcriptional regulator, Fis family  40.56 
 
 
452 aa  97.4  5e-19  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1112  response regulator receiver domain-containing protein  40.83 
 
 
399 aa  97.1  6e-19  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1183  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  33.66 
 
 
722 aa  97.1  6e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0910  sensory box histidine kinase/response regulator  26.59 
 
 
463 aa  97.1  7e-19  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1842  response regulator/sensory box histidine kinase  26.59 
 
 
492 aa  97.1  7e-19  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1932  Signal transduction histidine kinase  26.59 
 
 
492 aa  97.1  7e-19  Burkholderia pseudomallei 668  Bacteria  normal  0.0476253  n/a   
 
 
-
 
NC_009079  BMA10247_A1432  sensory box histidine kinase/response regulator  26.59 
 
 
492 aa  97.1  7e-19  Burkholderia mallei NCTC 10247  Bacteria  normal  0.188442  n/a   
 
 
-
 
NC_008784  BMASAVP1_0472  sensory box histidine kinase/response regulator  26.59 
 
 
492 aa  97.1  7e-19  Burkholderia mallei SAVP1  Bacteria  normal  0.798891  n/a   
 
 
-
 
NC_008835  BMA10229_0176  sensory box histidine kinase/response regulator  26.59 
 
 
492 aa  97.1  7e-19  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03091  hypothetical protein  38.79 
 
 
368 aa  96.3  1e-18  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007435  BURPS1710b_A0380  sensory box histidine kinase/response regulator  26.59 
 
 
463 aa  96.7  1e-18  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1391  response regulator receiver protein  36.43 
 
 
368 aa  96.3  1e-18  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_32720  Response regulator  36.5 
 
 
394 aa  95.5  2e-18  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0568  response regulator  39.13 
 
 
368 aa  95.5  2e-18  Vibrio cholerae O395  Bacteria  hitchhiker  0.00216047  n/a   
 
 
-
 
NC_008609  Ppro_0710  two component, sigma54 specific, Fis family transcriptional regulator  42.98 
 
 
456 aa  95.5  2e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1723  multi-sensor hybrid histidine kinase  22.72 
 
 
664 aa  95.1  3e-18  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007512  Plut_1417  two component Fis family transcriptional regulator  35.16 
 
 
492 aa  94.7  3e-18  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2713  two component, sigma54 specific, transcriptional regulator, Fis family  37.32 
 
 
454 aa  95.1  3e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2325  response regulator receiver modulated metal dependent phosphohydrolase  34.78 
 
 
362 aa  94.4  4e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.663275  n/a   
 
 
-
 
NC_007498  Pcar_1055  two component signal transduction response regulator  26.74 
 
 
734 aa  94  5e-18  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0148851  n/a   
 
 
-
 
NC_007777  Francci3_2152  PAS/PAC sensor hybrid histidine kinase  24.66 
 
 
670 aa  94.4  5e-18  Frankia sp. CcI3  Bacteria  normal  0.381885  normal 
 
 
-
 
NC_008740  Maqu_2223  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  28.83 
 
 
725 aa  94.4  5e-18  Marinobacter aquaeolei VT8  Bacteria  normal  0.847933  n/a   
 
 
-
 
NC_007799  ECH_0339  putative nitrogen regulation protein NtrX  37.93 
 
 
465 aa  94  5e-18  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  37.4 
 
 
458 aa  94.4  5e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2267  response regulator receiver protein  37.82 
 
 
367 aa  94  5e-18  Shewanella amazonensis SB2B  Bacteria  normal  0.0287525  normal  0.0560142 
 
 
-
 
NC_004347  SO_3196  response regulator  36.89 
 
 
367 aa  93.6  7e-18  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_002881  response regulator  37.93 
 
 
368 aa  94  7e-18  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2848  nitrogen regulation protein NtrX, putative  43.2 
 
 
455 aa  93.2  9e-18  Methylococcus capsulatus str. Bath  Bacteria  normal  0.754871  n/a   
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  39.06 
 
 
458 aa  92.8  1e-17  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_008554  Sfum_1934  two component, sigma54 specific, Fis family transcriptional regulator  38.52 
 
 
476 aa  92.8  1e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.808753  normal  0.132653 
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  39.04 
 
 
460 aa  92  2e-17  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0668  nitrogen assimilation regulatory protein ntrX  39.1 
 
 
471 aa  92  2e-17  Ehrlichia canis str. Jake  Bacteria  normal  0.514616  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  38.17 
 
 
455 aa  92.4  2e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_008009  Acid345_2399  multi-sensor signal transduction histidine kinase  27.23 
 
 
1131 aa  92  2e-17  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  39.06 
 
 
458 aa  92.4  2e-17  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1834  multi-sensor signal transduction histidine kinase  29.31 
 
 
681 aa  92.4  2e-17  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2546  response regulator receiver protein  37.29 
 
 
376 aa  91.7  3e-17  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1287  two component, sigma54 specific, transcriptional regulator, Fis family  39.67 
 
 
452 aa  91.7  3e-17  Chlorobium limicola DSM 245  Bacteria  normal  0.541874  n/a   
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  35.26 
 
 
463 aa  91.3  3e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  40.16 
 
 
387 aa  91.7  3e-17  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  36.89 
 
 
394 aa  91.3  3e-17  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_002939  GSU1658  response regulator/GGDEF domain-containing protein  41.67 
 
 
458 aa  91.3  4e-17  Geobacter sulfurreducens PCA  Bacteria  normal  0.939598  n/a   
 
 
-
 
NC_014230  CA2559_08281  two component, sigma54 specific, transcriptional regulator, Fis family protein  40.16 
 
 
388 aa  91.3  4e-17  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0350  PAS/PAC sensor hybrid histidine kinase  28.32 
 
 
1390 aa  91.3  4e-17  Mycobacterium sp. MCS  Bacteria  normal  0.0937102  n/a   
 
 
-
 
NC_008321  Shewmr4_1312  response regulator receiver protein  36.97 
 
 
367 aa  90.9  4e-17  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000399806  normal 
 
 
-
 
NC_008322  Shewmr7_1379  response regulator receiver protein  36.97 
 
 
367 aa  90.9  4e-17  Shewanella sp. MR-7  Bacteria  hitchhiker  0.00673289  normal  0.16507 
 
 
-
 
NC_009077  Mjls_0339  PAS/PAC sensor hybrid histidine kinase  28.32 
 
 
1390 aa  91.3  4e-17  Mycobacterium sp. JLS  Bacteria  normal  0.726297  normal  0.77171 
 
 
-
 
NC_008705  Mkms_0360  PAS/PAC sensor hybrid histidine kinase  28.32 
 
 
1390 aa  91.3  4e-17  Mycobacterium sp. KMS  Bacteria  normal  normal  0.592677 
 
 
-
 
NC_013093  Amir_3954  multi-sensor signal transduction histidine kinase  30.77 
 
 
1370 aa  90.9  5e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  0.364846  n/a   
 
 
-
 
NC_007760  Adeh_0417  two component, sigma54 specific, Fis family transcriptional regulator  38 
 
 
474 aa  90.5  6e-17  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.45134  n/a   
 
 
-
 
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