| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2526 |
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| Symbol | |
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| ID | 4663709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2952878 |
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| End bp | 2955025 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639820775 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_967969 |
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| Protein GI | 120603569 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.263284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0502692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATT CTCCTGCGCG TATACTCTGC ATCGACGATG ACGATGCCGA CCGCATGAAC
CTCGTGGCCT ACCTTGAGGA CAGCGGTTAC ATCGTCCTTG AGGCGGCGAA TGGCCGTGCA
GGGCTGGACG TCTTTCGGGC TGAACACCCC GACCTGATTC TTGTCGACCT CCGGATGCCC
GTCATGGGCG GTATGGAGGT CGTCGCGCAT ATGCGTGAGG AGGCACCGGG CGTGCCTGTC
ATCGTCGTGT CGGGGGCGGG TATTCTCGAA GAAGCCGTCG AGGCGCTGCG GCGCGGGGCA
TGGGACTATG TGACCAAGCC CGTCCTCGAC ATGCGGGTGC TGGAACACGC CGTGATGAAA
GCGCTCGAGC GCGCAAGACT CCTCGACGAA CGTCAACGCT ATCAGGAGCG TCTAGAGTTC
GAGGTCGAGG CACGCACGCG TGAACTGCGG GTTTCGAACG AGCAACTCCG CAGTACTCAG
TCGGAGTTGG AGGACAAGAG CCTCTTTCTC GAGACGCTCA TCGAAAGTCT GCCCAATCCG
CTTTTCTACA AGACGCTTGA TGGCGTCTAT ATCGGATGCA ACAAGGCCTT TTCACAGCTT
CTGGGCATCC CCCGCGAGAA GATGGTCGGC AGGTCGGCAC GAGACCTCTT GCCCGACCAT
GCCTATGCCC AGATCATAGC TGGTGATTGC CCTTCGGGCA GTGATGCCGG AGAGCACTCG
TGCGTCTTCG ATATCCTGGG TGCCGACGGG CATATCCATA CCCTCGCATT GTACAAGAGC
ACCTACAGCG ACAGTCAGGG GCAGGTCTCC GGCATCGTGG GCACCTTTCT CGACATCACC
GAACTCAAGC GCAAAGAGGC GCAGATAGTC CATCAAGCGA CACATGATGA ATTGACGGGG
CTGCTCAACC GCTTCGGCAT GCGTCAGCAT GTCGACCGTC TTATCGTGGG CGGGCAGATG
TCGTTCGCCC TGCTGGTCAT CGACCTCGAC GACTTCAAGA CGATCAACGA CAGCCTCGGG
CACGCCCTTG GCGACAGGCT GCTGCACAAG GCAGCAGAGC GCATCGTCGA ACTGGTGGGT
AGTCAGGGCA TCGTAGGACG CCCCGGCGGG GACGAGTATG TCGTGCTCCT CTACAATGTC
GATGCAGAGG CCGCCCACGC CATGGCACGT CGTATTCTCG ACATTTTCAC GGACAGCCTG
TCCGTGTCCG GCCACGAAGT CTACATATCA CTCAGTATCG GCATCGCGGT GTACCCCGAA
GATGGGGATG ACGCCGCCAA CCTCTTCAAG TGCTGCGACA TCGCCATGTA CCGGGCCAAG
GAAGAGGGGG GCGCCCGTGC CCAACGGTAT CTCGCCGCCA TGCAGGACGT GATCACCAGT
CGGCTTGCAC TTGAAAAGAA CCTTCGCAAG GCGCTGGAAC GGGGCGAGTT CGTCCTGCAT
TACCAGCCCA AGGTCGACAT CAGGACAGGG GCTGTGACAG GCATGGAGGC GCTGGTGCGG
TGGGTTCGTG ACGATGGGAC CATCGTTCCG CCGCAGGATT TCATCCCCGT GGCGGAGAAG
ACCGGACTCA TCGTCGCTCT TGGCGAATTC GTGCTGCGCG AGGCCTGTCG CCAGATGCAT
GCGTGGCAGA AGCGGTTCGG GCGGCTCAAG ATGGCCGTCA ACATTTCGGC CCGGCAATTC
CAGCCCGGAC TTCCGGATAC TGTCGCTTCG GCCCTTGCCG ATGCGGGCCT CGACCCGGGG
CTGCTCGAGC TTGAGATCAC CGAAACGACC ATGATGCGCG ACCTCGCGTT GACGGTTTCG
GTGCTTGAGC GGCTCACCAC CGGGGGCATC GCCGTCGCCA TCGACGACTT CGGCACGGGC
CACTCTTCGC TCTACTACCT CAAGACGTTC CCCATCAGTT CCATCAAGAT CGATCGTTCG
TTCGTGCGGG ACATACCCAA TGACGAGACC GATGCCACCA TCGTGACCAC GGTGGTGAGC
ATGGGGCGCA ACCTCGGCAT CGGCATCGTG GCTGAAGGTG TCGAAACCGA GGCTCAGCTC
GATTTCCTGC GGAGCCTGGA GTGCCCCGAG GTTCAGGGCT ACTACTTCTC GAAGCCCCTT
CCGCCCCACG CTTTCGAGGC GTGGATGGAA AACCGCCTTA GAGTCTGA
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| Protein sequence | MSDSPARILC IDDDDADRMN LVAYLEDSGY IVLEAANGRA GLDVFRAEHP DLILVDLRMP
VMGGMEVVAH MREEAPGVPV IVVSGAGILE EAVEALRRGA WDYVTKPVLD MRVLEHAVMK
ALERARLLDE RQRYQERLEF EVEARTRELR VSNEQLRSTQ SELEDKSLFL ETLIESLPNP
LFYKTLDGVY IGCNKAFSQL LGIPREKMVG RSARDLLPDH AYAQIIAGDC PSGSDAGEHS
CVFDILGADG HIHTLALYKS TYSDSQGQVS GIVGTFLDIT ELKRKEAQIV HQATHDELTG
LLNRFGMRQH VDRLIVGGQM SFALLVIDLD DFKTINDSLG HALGDRLLHK AAERIVELVG
SQGIVGRPGG DEYVVLLYNV DAEAAHAMAR RILDIFTDSL SVSGHEVYIS LSIGIAVYPE
DGDDAANLFK CCDIAMYRAK EEGGARAQRY LAAMQDVITS RLALEKNLRK ALERGEFVLH
YQPKVDIRTG AVTGMEALVR WVRDDGTIVP PQDFIPVAEK TGLIVALGEF VLREACRQMH
AWQKRFGRLK MAVNISARQF QPGLPDTVAS ALADAGLDPG LLELEITETT MMRDLALTVS
VLERLTTGGI AVAIDDFGTG HSSLYYLKTF PISSIKIDRS FVRDIPNDET DATIVTTVVS
MGRNLGIGIV AEGVETEAQL DFLRSLECPE VQGYYFSKPL PPHAFEAWME NRLRV
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