| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2117 |
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| Symbol | |
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| ID | 1183764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2291187 |
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| End bp | 2292371 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637393495 |
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| Product | response regulator |
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| Protein accession | NP_791939 |
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| Protein GI | 28869320 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0129975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAA CCAGTGCCAA GCTGCTGATT ATCGATGACG ACGACGTAGT GCGCGCAAGC
CTTGCCGCCT ACCTGGAAGA CAGTGGCTTC AGCGTTCTGC AGGCCAGTAA CGGCTTGCAG
GGAATTCAGA TATTCGAGCA AGAGAACCCC GATCTTGTGG TCTGCGATCT GCGCATGCCA
CAGATGGGCG GTCTTGAGCT GATCCGTCAG GTCACCGCTA TCGCGCCTCA GACCCCTGTC
ATCGTGGTTT CCGGTGCGGG CGTGATGAGC GATGCGGTTG AAGCCCTGCG CCTGGGCGCC
GCCGATTATC TGATCAAGCC GCTTGAAGAC CTCGCGGTCC TCGAGCATTC GGTGCGCCGC
GCACTGGATC GGTCACGCCT GCTCAATGAA AATCAGGTCT ATCGTGAACA ACTGGAGAAG
GCCAATCGCG AGCTCGAAGC CAGCCTTCAT CTTTTGCAGG AAGACCAGGA CGCAGGCCGG
CAAGTACAGA TCAACATGCT GCCCATCACC CCTTGGTCAA TTGCCGAGTT CAAGTTTGCG
CATCAGATCA TCCCGTCCCT GTACCTGTCC GGCGACTTCG TGGACTACTT CCGGGTCGAC
GAACGGCGTG TAGCGTTCTA TCTGGCGGAT GTTTCTGGCC ATGGTGCGTC ATCGGCGTTC
ATTACCGTGC TGCTGAAATT CATGACCACG CGTTTGCTGT TCGAGTCCAA GCGCGGTGGC
ACGTTGCCCG AATTCAAGCC GTCGGACGTA CTGGGGCACA TCAATCGCGG GCTCATCAGT
TGCAAGCTGG GCAAGCATGT GACGATGGTC GGCGGTGTCA TTGACGAAGA GTCGGGTAAA
CTGACGTATG CCGTCGGCGG CCACTTGCCG CTGCCGGTCT TGTATTCCGA GGGGCAGGCG
CGTTATCTGG ACGGCCGTGG GCTTCCGGTC GGGCTGTTCA ATGAAGCGAC GTATCAGGAT
CATGAAATCG ACCTGCCAGC GTCCTTCAGT CTGACCATGT TGTCTGATGG CATACTGGAT
CTGTTGCCCG GTGATACACT CAAAGAGAAA GAAGCCATTC TTCCGGAGTT GGTGAAGAAG
GCTGGCGGCA GACTGGATGG CTTGCAGCGG GTTTTTGAAT TGGCAACACT TGGGGAGATG
CCGGATGATA TCGCCTTGTT AGTGTTAAGC AGGAATCTTG AATGA
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| Protein sequence | MPKTSAKLLI IDDDDVVRAS LAAYLEDSGF SVLQASNGLQ GIQIFEQENP DLVVCDLRMP
QMGGLELIRQ VTAIAPQTPV IVVSGAGVMS DAVEALRLGA ADYLIKPLED LAVLEHSVRR
ALDRSRLLNE NQVYREQLEK ANRELEASLH LLQEDQDAGR QVQINMLPIT PWSIAEFKFA
HQIIPSLYLS GDFVDYFRVD ERRVAFYLAD VSGHGASSAF ITVLLKFMTT RLLFESKRGG
TLPEFKPSDV LGHINRGLIS CKLGKHVTMV GGVIDEESGK LTYAVGGHLP LPVLYSEGQA
RYLDGRGLPV GLFNEATYQD HEIDLPASFS LTMLSDGILD LLPGDTLKEK EAILPELVKK
AGGRLDGLQR VFELATLGEM PDDIALLVLS RNLE
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