| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1112 |
|---|
| Symbol | |
|---|
| ID | 3968299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1440314 |
|---|
| End bp | 1441513 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637920183 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_526586 |
|---|
| Protein GI | 90020759 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAT CGGGTAGGCG ATTACTCGTC ATCGATGACG ATACCATTGT GCGTCAGAGT
ATTGCAGCGT ATTTAGAGGA TAGCGGGTTT CTTGTGCATC AAGAAGCCGA TGGTCACTCC
GCGCTTACGT GGTTGATGGA TAACCCTCCC TGCCTTGTTT TAACCGATTT ACGCATGCCC
GGCACCGATG GCTTAACCTT GCTTAAAGCT ATTCGCGAGT GGGATGTAGA GCTGCCCGTT
ATAGTTATAT CTGGCGCGGG GGCTGTGCAC GATGTAGCTG AGGCGTTGCG CCACGGAGCA
TCTGACTACT TAGTAAAACC CATTGTGGAT ATGGAAGTAC TGGTGCACTC AATTCGCAGG
GCTCTAGAGC GTCACGAACT GATAATTGAA AATCGCCAGT ACAGGTTGGA GCTAGAAAAA
GCCAATAAAG AGCTGAAAGA ATATATTCGT GTGCTTGAGC GCGATCAGCT GGCAGGGCGC
CGCGTGCAAA GTAAACTACT CCCACCGCCG GCTGTTAGCT TTGGCGGAAT CAATGTCGAT
TACAAAATCA TCCCATCGTT GTATCTCAGC GGTGATTTTG TCGATTACGG CTTCCTTTCC
AACCGTTATT TAGCCTTCTA TCTTACTGAT GTTTCCGGTC ATGGTGCTGC CTCTGCGTTT
GTCACCGTAT GGCTTAAACA AATAGTGCGC CGCTTCTTTC GCGAGCAAGA AATCTTCAAT
ACTAAGGACT CTTTCGAGCG AGATACCGCA TCTCTTCTAA AATTAATAAA TAAGGAAGTG
ATTCGCTCGA AAGTAGGGGC GCATATGACC TGTTTTGTGG GGGTGATAGA TACCCATACC
CACGAGATGC GCTATGTGGT GGCGGGGCAT TTACCGCTGC CGCTGCTAAT AGCCAACGGT
CGTGCCGAAT ACTTAGAAGG TAAAGGCAAG CCACTGGGCA TATTTGAAGA TGCCGAGTGG
GAAGTGCAGA GTATTCAGCT GCCGCTACAG CAGCAGTTTT CGTTGGTGGT GTTCTCCGAT
GGCGTGCTAG AAGTACTACC GCCAGATAAC CTCATCGAAA AAGAAAATTA TTTACGCAAT
ATACTGTCAA AACAACAGGG TAGCATTGAA GATATATGTG CGGCGTTACA AATCAACAGC
TTAGATGCTG CGCCGGATGA TATTGCTGTT CTCAAAATAG ATAATGAGAT GTTGAAATGA
|
|---|
| Protein sequence | MSQSGRRLLV IDDDTIVRQS IAAYLEDSGF LVHQEADGHS ALTWLMDNPP CLVLTDLRMP
GTDGLTLLKA IREWDVELPV IVISGAGAVH DVAEALRHGA SDYLVKPIVD MEVLVHSIRR
ALERHELIIE NRQYRLELEK ANKELKEYIR VLERDQLAGR RVQSKLLPPP AVSFGGINVD
YKIIPSLYLS GDFVDYGFLS NRYLAFYLTD VSGHGAASAF VTVWLKQIVR RFFREQEIFN
TKDSFERDTA SLLKLINKEV IRSKVGAHMT CFVGVIDTHT HEMRYVVAGH LPLPLLIANG
RAEYLEGKGK PLGIFEDAEW EVQSIQLPLQ QQFSLVVFSD GVLEVLPPDN LIEKENYLRN
ILSKQQGSIE DICAALQINS LDAAPDDIAV LKIDNEMLK
|
|---|
| |