Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1522 |
Symbol | |
ID | 3756038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | + |
Start bp | 1542259 |
End bp | 1543893 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637782401 |
Product | histidine kinase |
Protein accession | YP_388016 |
Protein GI | 78356567 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGACACA GGATGGCTGA GTGTGCTCTT CCCCGCGTGC TGGCTATAGA TGACGAGTCT TCCGTCCGGC AGAGTCTGGC GATTTTTTTT GAAGACTGCG GTTACGAGGT GCTGGAGGCG TCTGACGGCT ATGAAGGCAT TGAAACCGCT CTGCGTGAAC GGCCCGATGT CATTCTGGTA GATTTGCGCA TGCCCGGCAT TGACGGCATA GAGGTGCTGC GCAGGCTTTC TTCCGAACTT CCCGATACTC CCGCCATTGC CGTTTCCGGC GTGGGCGTGC TTGAACAGGC TCTTGAAGCC ATGCGCAGCG GCGCTTGGGA TTTCATTTCC AAGCCTGTCG AAGATTTTGA AGTGCTCAGA AAGGCCGTGG AATCCGCCCG CGAACGGGCG GACCGCAAAC GCCGCAAGCG GGGCTACCAC CAGCATCTTG AACGGGAGGT GGCGGCAAGA ACCCGGGAAC TGGCCATGGC CAAGGAAGAG GCGGAACTGG CCAGCAGGGC CAAGTCGCAG TTTCTTGCCA ACATGAGCCA CGAACTGCGT ACACCGCTTA ACGGGATAAT CGGGCTTACC GATCTGCTGC TGTGCGCCCC CGCCGGCGGC GACCACCGTG AATATCTTGA AATGGTAAAG CAGGCGGGTC AGGAACTGCT GACCATTGTC AATAATCTTC TGGATATGTC CAGCATTGAG GCCTGCCGTC TGGTGCTGCG CGAAACGCCT TTCTCGCTGC GCGAAAGCGT GGGCGAGGTC AAGCGCATTC TCGAAATTCA GGCCAGATGG AAAAACCTCG ATTTTGCAGT GTTTTTTGAT GACGGGATTC CCGATCTGTT TGTGGGTGAT GCAGGCAGGC TGAAGCAGAT ACTGAGTAAT CTGCTGGTCA ACGCCATAAA GTATACCGAT AAAGGGGGCG TATCGCTGCG CGTCTCTTCT GCACCGTGCA CTGCCGGTGA TACAGTCAGG TTATGCTTTT ATGTGCAGGA TACCGGAGTG GGGATTGATC CGGAAAAGCG CGAGACCATA TTTGAGCCGT TTGTTCTCGG CGAAAGTTTT ATGACCAAAA AGAGTGGCGG AGCAGGGCTG GGGCTGGCTA TTTCGCGCGA ACTGGCCCGT AAAATGGGGG GGGATGTGCA CGCGTCACGC TGCGCCGAAG GCGGCAGCCT GTTTGAGTGC ATCGTCGAGC TGCGCAAATG TGAAGAAGAA GCGCCTGTGG CAGCCGAAAA AACATGTCCG CTTGCGAGAA CGTCCAAGCC GCTGCGTATT CTGCTGGCGG AGGACGATAT AATAAACCGT AAACTTGCCG TGTTCTTTTT TGAAAAAATG GGTCATGCCG TAAGGGCTGT GGGCACCGGT ATAGAAGTGC TGCAGGCGCT TGCGCAGGAA CCTTTTGATC TGATTCTCAT GGATATCCAG ATGCCGGATA TGGACGGTGT GGAGGCTACC CGCGCCATCC GCAGCGCGCA GGGCGGCAGA ATCAGATCTG ATATCCCCAT CATTGCCATG ACGGCCCATG CCATGAAGGG CGACAAAGAG CGTTTTCTTA CTGCCGGTAT GGACGGATAT GTTTCAAAGC CGGTGGACTT TCCTGCGCTG ATGCAGCGCA TTGAAGCTCT TTCGCAGCAG CAATCAAAGC TGTAG
|
Protein sequence | MRHRMAECAL PRVLAIDDES SVRQSLAIFF EDCGYEVLEA SDGYEGIETA LRERPDVILV DLRMPGIDGI EVLRRLSSEL PDTPAIAVSG VGVLEQALEA MRSGAWDFIS KPVEDFEVLR KAVESARERA DRKRRKRGYH QHLEREVAAR TRELAMAKEE AELASRAKSQ FLANMSHELR TPLNGIIGLT DLLLCAPAGG DHREYLEMVK QAGQELLTIV NNLLDMSSIE ACRLVLRETP FSLRESVGEV KRILEIQARW KNLDFAVFFD DGIPDLFVGD AGRLKQILSN LLVNAIKYTD KGGVSLRVSS APCTAGDTVR LCFYVQDTGV GIDPEKRETI FEPFVLGESF MTKKSGGAGL GLAISRELAR KMGGDVHASR CAEGGSLFEC IVELRKCEEE APVAAEKTCP LARTSKPLRI LLAEDDIINR KLAVFFFEKM GHAVRAVGTG IEVLQALAQE PFDLILMDIQ MPDMDGVEAT RAIRSAQGGR IRSDIPIIAM TAHAMKGDKE RFLTAGMDGY VSKPVDFPAL MQRIEALSQQ QSKL
|
| |