Gene CA2559_08281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_08281 
Symbol 
ID9297140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp1814289 
End bp1815455 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content36% 
IMG OID 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family protein 
Protein accessionYP_003716403 
Protein GI298208224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAAA TACTTATAAT AGAAGACGAA GCTGCAATAC GCCGCGTACT TACAAAAATA 
CTTTCTGAAG AAAATGACAC GTATGAAGTG CAAGAGGCAG AAGATGGTCT TTCTGGAATT
GAGCTTATAA AAGATAATGA TTTTGACTTG GTTCTTTGTG ATATTAAGAT GCCAAAGATG
GATGGTGTCG AAGTGTTAGA AGCTGCGAAG AAAATTAAAC CAGAAACTCC AATTGTTATG
ATTTCTGGTC ATGGCGATTT AGATACTGCG GTAAACACTA TGCGTTTAGG AGCATTCGAT
TATATTTCTA AACCACCAGA TTTAAACAGG CTTTTAAATA CCGTTAGAAT TGCATTAGAT
AGAAAAGAAC TTGTAGTTGA AAACAAACGA TTAAAGCGTA AGGTTGGTAA AAACTATCAA
ATGATAGGCG AGTCTAAAGA AATAGACACT ATTAAGGAAA TGATAGAAAA AGTAGCACCT
ACAGATGCAC GAGTGCTTAT AACAGGTCCT AATGGTACTG GAAAAGAGTT GGTAGCACAT
TGGATACACC AAAAGAGTGA ACGCTCTAAA GGACCAATGA TTGAGGTTAA CTGTGCTGCA
ATACCTTCAG AATTAATTGA AAGTGAATTA TTTGGTCACG TAAAAGGTGC ATTTACTTCT
GCAAACAAAG ATCGCGCTGG TAAGTTTGAA GCTGCAAATG GTGGTACAAT TTTCTTAGAT
GAGGTTGGTG ATATGAGTCT GTCAGCACAG GCTAAAGTAC TACGTGCACT TCAAGAAAAT
AAGATTCAAC GTGTGGGTAG TGATAAGGAT ATAAAAGTAA ATGTACGTGT TGTAGCCGCT
ACAAATAAAG ACCTTAAACA AGAAATAGAA GAAAAGAATT TTAGGGAAGA CCTTTACCAT
AGGCTTGCAG TAATTCTTAT AAAAGTACCT TCATTAAACG AGCGTAGAGA AGATATACCA
CTACTGGTAA ACTATTTTTC TGGTAAGATA TCTGAAGAAC ACGGCACACC TGCTAAAAGT
TTTTCAAAAG ATGCCATCAA GCTATTACAG GAATATGATT GGACAGGAAA CATACGTGAA
CTGCGTAATG TTGTTGAGCG CCTTATAATT TTAGGAAACA AAGAGATTGT AGAAACAGAT
GTAAAGATGT TTGCTAGTAA GCAATAG
 
Protein sequence
MPKILIIEDE AAIRRVLTKI LSEENDTYEV QEAEDGLSGI ELIKDNDFDL VLCDIKMPKM 
DGVEVLEAAK KIKPETPIVM ISGHGDLDTA VNTMRLGAFD YISKPPDLNR LLNTVRIALD
RKELVVENKR LKRKVGKNYQ MIGESKEIDT IKEMIEKVAP TDARVLITGP NGTGKELVAH
WIHQKSERSK GPMIEVNCAA IPSELIESEL FGHVKGAFTS ANKDRAGKFE AANGGTIFLD
EVGDMSLSAQ AKVLRALQEN KIQRVGSDKD IKVNVRVVAA TNKDLKQEIE EKNFREDLYH
RLAVILIKVP SLNERREDIP LLVNYFSGKI SEEHGTPAKS FSKDAIKLLQ EYDWTGNIRE
LRNVVERLII LGNKEIVETD VKMFASKQ