Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmul_A1287 |
Symbol | |
ID | 3784324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosospira multiformis ATCC 25196 |
Kingdom | Bacteria |
Replicon accession | NC_007614 |
Strand | - |
Start bp | 1479126 |
End bp | 1480838 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637811374 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_411982 |
Protein GI | 82702416 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAC CCCTGATTCG CGTTCTACTC GTCGAAGACG ATGCCGTGGA TCGTATGGCG TGTCGACGTG CTCTTGCCCG GGACCCCGAC TACGAATTCG TGCTTTCCGA AGCCGAATCA GGCCGGGAGG GATTGCAACT TGCCCATGAG CAGAAGCCGG ACTGCGTCCT GCTTGATTAC CATTTGCCGG ATGTGAATGG TCTTGAGTTT CTGGCAGCGC TGACCGACGA AAGTGGCGAT GTTTCCATTC CGGTCATGAT GCTGACAGGT ACGGACAATG CCGCCATTGC GGTAGAAGCT ATGAAGCGCG GGGCGAAGGA TTACCTGATC AAGGACCTCG AGCACCAATA CCTTGAATTA TTGCCTGCCG TTATCCAGCG CGTACTGAGC GACCGCCGGA TTCGGCTGGA AAAAAAGCAG GCGGAAGAGA AACTCGCCCA GGCGGAAGCC AAATATCGCT CTCTGGTCGA AACCATTCCG GCAATCGTCT ACATTGCTGC ACTGGATGGG AGCAACCGTT TCCTTTACGT CAGCTCGCGT ATCAATATGC TTGGTTTTTC AGCGGAACAG TGGTTGAACG ATCCGACTAT CCTGCTTGCA CAGATTCATC CGGACGACCG GTCGCACGCA CTCGAGGAGC GGGCAAAAAG CCGCGCAACG TGCGCCCCTC TGCGCTGTGA GTACCGTTTG CTTACTCAGG ATGAAAGAGT CTTGTGGTTC CGCGACGAGG CGAATGTTGT GCGGGATGAA TCGGGACGCT CACTGTTTCT GCAGGGTATC CTGGTTGATA TCACGGAAAG CAAACAGGCA GAAGAGGAGT TGAAGCAGCA TCGTTTTCGT CTCGAAGAGC TCGTGGCCAA GCGCACCGAT GAACTGGCGC GGGTGAACGA AGAGTTGCGG CGCGATATCA CCCACCGCAA GCTGATCGAA GAAGAACTGA TCAAAGCCAA GACAGAGGCG GAAAAGGCCA ATCTGGCCAA ATCGGATTTT CTTTCCAGCA TGAGCCACGA ATTACGCTCA CCCCTGAATG TCATGCTTGG TTTCGCCCAA TTGATGGAAT CGAGTTCTCC GCCGCCAACA TTCACGCAAA TGACCATGCT CAAGGAGATC AATTCTGCAG GATGGTATCT GCTTGAATTG ATAAATAAAA TCCTCGATCT CGCCGCAATC GAGTCCGGCA AACTGATTGT TGCGCAGGAA CCGATGTGCA TCGGAGAGGT GATGGCCGAG TCCCGGACCA TGGTCGAACC GCAGGCCCAG GAGCAAAACA TACGGCTGAT CTTTCCGCCA TCATCGGACA TGAACTTCTT CGTTCGGGCA GACCGAACGC GGGTGAAGCA GGTTCTGATC AATCTTCTTT CCAACGCAAT CAAATACAAC CGCGAGGGTG GCATGGTCGA AGTGAGTTGC TCCATGACCA AACCCGGGCG TCTGCGAATA AGTGTGCGCG ATACGGGGAC GGGGCTGCCG CCGGAAAAAC TGACGCAGCT TTTTCAGCAA TTCAACCGGC TTGGACAGGA AGCAGGGTCT GTGGAAGGCA CAGGCATTGG ACTGGTAGTG ACGAAACAAC TGGTTGAACT GATGGGCGGA TCAATCGGTG TGGAAAGCAC TGTCGATGTC GGCAGTGTGT TCTGGTTTGA ACTCATGGTT GATGAACCTT CCCAGGCTGC TTCCGATATA GATAAAAACG AGGAGTTCAG TACTGAAGGT TAA
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Protein sequence | MTKPLIRVLL VEDDAVDRMA CRRALARDPD YEFVLSEAES GREGLQLAHE QKPDCVLLDY HLPDVNGLEF LAALTDESGD VSIPVMMLTG TDNAAIAVEA MKRGAKDYLI KDLEHQYLEL LPAVIQRVLS DRRIRLEKKQ AEEKLAQAEA KYRSLVETIP AIVYIAALDG SNRFLYVSSR INMLGFSAEQ WLNDPTILLA QIHPDDRSHA LEERAKSRAT CAPLRCEYRL LTQDERVLWF RDEANVVRDE SGRSLFLQGI LVDITESKQA EEELKQHRFR LEELVAKRTD ELARVNEELR RDITHRKLIE EELIKAKTEA EKANLAKSDF LSSMSHELRS PLNVMLGFAQ LMESSSPPPT FTQMTMLKEI NSAGWYLLEL INKILDLAAI ESGKLIVAQE PMCIGEVMAE SRTMVEPQAQ EQNIRLIFPP SSDMNFFVRA DRTRVKQVLI NLLSNAIKYN REGGMVEVSC SMTKPGRLRI SVRDTGTGLP PEKLTQLFQQ FNRLGQEAGS VEGTGIGLVV TKQLVELMGG SIGVESTVDV GSVFWFELMV DEPSQAASDI DKNEEFSTEG
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