Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3140 |
Symbol | |
ID | 4573434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3442649 |
End bp | 3444913 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639757199 |
Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_902791 |
Protein GI | 118581541 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAGCC TGAACACGAC AACCAGGGCT GCCCTTGAGC GTCACGACAG GCCGCACAGC ATCCTGATTG TGGATGACGA GCCGCGCATG CGCACAAGCC TGCGCATCCT GCTGCAGGAG AGCGGGCGCG AAATACTGGA GAGCAAAAGC GGGGGCGAGG CGATCGCCAC GCTGAAAACG AAGCAGATCG ACCTGGTCCT GCTTGACATC ATCCTCCCCG ACATCTCCGG CCTGGATGTC CTGGAGTGGA TCACCAGCAG GGGAGACGCA CTCCCGGCCA GCGTCATCAT AGTCAGCGTC GATGACAACA TCGACTCAGC CATCCACGCC CTACGCAACG GTGCCTCTGA ATATATCCGC AAACCGTACG AACCGGAGGT CATCCAGCAC AAAGTCAGAA ACATCCTCTA CCGGCGCCAC CTGGAACGCG ACCATGTGCT GATAACTTCC CGCCTGCAAC ACTCGGAGCA GCTGCATCGC TTCCTGGTGG AGAGCTCTCC CGACCTGATC TTCACCCTGG ACAACTCCGG CTGTTTTACG TTCATCAACA GTCGCATCGA ATCGCTGCTC GGCTTCTCGC GCGAGGAGTT GATCGGCAGC TGCTACGACA CCATCGTCCT TGCCGAGGAC TTAAAAACAG CCCAGCACCC CTTTACCGAA CGCCGCCGGG GCAACCGAGC CACCACCAAC CTTGAGATAC GGCTGAAGTG CACCCCCAGC CATTACCGTA ACTTTGAGAA TCACCATATC GTGGTGATGA TGAGCTCAAC CGGCATCTAC GGCGAGCACG ACAACGACTT CCCGCTTGCC CGCTGCTTCA GCGGCACCTA TGGCGTGGCC CGCGACATCA CCGACCGGAA AATCGCCGAG GAGACCATCG CCTTCCAGGC CTTCCACGAC CACCTCACCC ACCTGCCCAA CCAGCGACTC TTCAAGGACC GCCTGGAAAT GGCCATAACC CACTCCAAGC GCCATGGGGG AATGGTCGGA GTCATGTTCA TCGATTTGGA TCGTTTCAAG ATCGTCAACG ACACCCATGG TCACGCCGCC GGCGACGAAC TACTGAAGAA CGTCGCCCAC CGCCTGCGCC ACTGCATCCG CGCCGTGGAC ACCCTGGCGC GCAAGGGGGG AGACGAGTTC ACCGTGCTGC TGCCGGATCT GATGCGCGCC GAGGACGCGG CCCTGATCGC CGAAAAAATC ATGCACGAAC TGGGTATCCC CTTTTCCGTT GCCGGACAGA AGTTTCACGT TTCCGCCAGC ATCGGCATAG CCATCGTGCC ACGGGACGGG GAGAGTATCG ATACCCTTTT GAAGAGCGCC GACATCGCCA TGTACCGGGT CAAGGCCAGC GGCAAGAACG GCTACCGCTT CTTTACCCCG GACATGAACA TCTGTTACAC CAAACGCATC AGCCTGGAAA ACGAACTGCG CCAGGCGATC CCCAACTCGG AATTCGAACT ATTCTACCAG CCCCAGGTCA GCATCAACGG AGCCTCCATC ATCGGCCTTG AAGCGCTGAT TCGTTGGCGT CACCCGACCC ACGGCCTGTT GAATCCGGGA GATTTCATCG AACTGGCCGA GGAAACCGGC ATGATCGGCA CCATCACCGA CTGGGTACTG GCCGAGGCCT GCAGACAGTT AGCCCACTGG CGTTCCATGG GGTTCAGCGA CCTGCGCATT GCCGTGAACG TATCCCCCAA GGAGTTCGAA CGGGACGACA TGGTGGAGCA GCTCTCAAGA TTCATGTCCA CCTTCCAACT TCCACCGGAC TCCCTGGAGG TGGAGATAAC GGAAAAGATC CTCCTGCGCG ACACCCCCAG CGTCATCAAC AAGATGAAGA CCCTGCGCGA ACGGGGCATA CGCATCTCCA TCGACGATTT CGGCACCTGC TATTCGTCAC TCAACTATCT GCGGCAGTTC CCCATCAGCA CCATCAAGAT CGACCAGTCC TTTGTACGCG ACCTGTCGGA AGAACACCGC ATCTCACCGA TCATACAGGC CATCATCGGC ATAGCCAATG GCTTCGGCCT GCACCTGCTG GCAGAAGGCG TGGAGACGCA CTGCCAGATG CAGACCCTGC ATGCACTGGG CTGCAACGAG ATGCAGGGCT ATCTGTTCAG CAGGCCGGCA CCAGCCGAAC AGATCGAGCA GATGCTGTGC CACACGATCT CACACACCAC ATTGCAATCG CCGGACTTCC TCACCCATCC GCAACTGCTC TCCCCTCTGC TCACTCAGGG CCTCCAGGAA CGCCCCCTGG CTTGA
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Protein sequence | MNSLNTTTRA ALERHDRPHS ILIVDDEPRM RTSLRILLQE SGREILESKS GGEAIATLKT KQIDLVLLDI ILPDISGLDV LEWITSRGDA LPASVIIVSV DDNIDSAIHA LRNGASEYIR KPYEPEVIQH KVRNILYRRH LERDHVLITS RLQHSEQLHR FLVESSPDLI FTLDNSGCFT FINSRIESLL GFSREELIGS CYDTIVLAED LKTAQHPFTE RRRGNRATTN LEIRLKCTPS HYRNFENHHI VVMMSSTGIY GEHDNDFPLA RCFSGTYGVA RDITDRKIAE ETIAFQAFHD HLTHLPNQRL FKDRLEMAIT HSKRHGGMVG VMFIDLDRFK IVNDTHGHAA GDELLKNVAH RLRHCIRAVD TLARKGGDEF TVLLPDLMRA EDAALIAEKI MHELGIPFSV AGQKFHVSAS IGIAIVPRDG ESIDTLLKSA DIAMYRVKAS GKNGYRFFTP DMNICYTKRI SLENELRQAI PNSEFELFYQ PQVSINGASI IGLEALIRWR HPTHGLLNPG DFIELAEETG MIGTITDWVL AEACRQLAHW RSMGFSDLRI AVNVSPKEFE RDDMVEQLSR FMSTFQLPPD SLEVEITEKI LLRDTPSVIN KMKTLRERGI RISIDDFGTC YSSLNYLRQF PISTIKIDQS FVRDLSEEHR ISPIIQAIIG IANGFGLHLL AEGVETHCQM QTLHALGCNE MQGYLFSRPA PAEQIEQMLC HTISHTTLQS PDFLTHPQLL SPLLTQGLQE RPLA
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