| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3140 |
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| Symbol | |
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| ID | 4573434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3442649 |
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| End bp | 3444913 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639757199 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_902791 |
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| Protein GI | 118581541 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAGCC TGAACACGAC AACCAGGGCT GCCCTTGAGC GTCACGACAG GCCGCACAGC
ATCCTGATTG TGGATGACGA GCCGCGCATG CGCACAAGCC TGCGCATCCT GCTGCAGGAG
AGCGGGCGCG AAATACTGGA GAGCAAAAGC GGGGGCGAGG CGATCGCCAC GCTGAAAACG
AAGCAGATCG ACCTGGTCCT GCTTGACATC ATCCTCCCCG ACATCTCCGG CCTGGATGTC
CTGGAGTGGA TCACCAGCAG GGGAGACGCA CTCCCGGCCA GCGTCATCAT AGTCAGCGTC
GATGACAACA TCGACTCAGC CATCCACGCC CTACGCAACG GTGCCTCTGA ATATATCCGC
AAACCGTACG AACCGGAGGT CATCCAGCAC AAAGTCAGAA ACATCCTCTA CCGGCGCCAC
CTGGAACGCG ACCATGTGCT GATAACTTCC CGCCTGCAAC ACTCGGAGCA GCTGCATCGC
TTCCTGGTGG AGAGCTCTCC CGACCTGATC TTCACCCTGG ACAACTCCGG CTGTTTTACG
TTCATCAACA GTCGCATCGA ATCGCTGCTC GGCTTCTCGC GCGAGGAGTT GATCGGCAGC
TGCTACGACA CCATCGTCCT TGCCGAGGAC TTAAAAACAG CCCAGCACCC CTTTACCGAA
CGCCGCCGGG GCAACCGAGC CACCACCAAC CTTGAGATAC GGCTGAAGTG CACCCCCAGC
CATTACCGTA ACTTTGAGAA TCACCATATC GTGGTGATGA TGAGCTCAAC CGGCATCTAC
GGCGAGCACG ACAACGACTT CCCGCTTGCC CGCTGCTTCA GCGGCACCTA TGGCGTGGCC
CGCGACATCA CCGACCGGAA AATCGCCGAG GAGACCATCG CCTTCCAGGC CTTCCACGAC
CACCTCACCC ACCTGCCCAA CCAGCGACTC TTCAAGGACC GCCTGGAAAT GGCCATAACC
CACTCCAAGC GCCATGGGGG AATGGTCGGA GTCATGTTCA TCGATTTGGA TCGTTTCAAG
ATCGTCAACG ACACCCATGG TCACGCCGCC GGCGACGAAC TACTGAAGAA CGTCGCCCAC
CGCCTGCGCC ACTGCATCCG CGCCGTGGAC ACCCTGGCGC GCAAGGGGGG AGACGAGTTC
ACCGTGCTGC TGCCGGATCT GATGCGCGCC GAGGACGCGG CCCTGATCGC CGAAAAAATC
ATGCACGAAC TGGGTATCCC CTTTTCCGTT GCCGGACAGA AGTTTCACGT TTCCGCCAGC
ATCGGCATAG CCATCGTGCC ACGGGACGGG GAGAGTATCG ATACCCTTTT GAAGAGCGCC
GACATCGCCA TGTACCGGGT CAAGGCCAGC GGCAAGAACG GCTACCGCTT CTTTACCCCG
GACATGAACA TCTGTTACAC CAAACGCATC AGCCTGGAAA ACGAACTGCG CCAGGCGATC
CCCAACTCGG AATTCGAACT ATTCTACCAG CCCCAGGTCA GCATCAACGG AGCCTCCATC
ATCGGCCTTG AAGCGCTGAT TCGTTGGCGT CACCCGACCC ACGGCCTGTT GAATCCGGGA
GATTTCATCG AACTGGCCGA GGAAACCGGC ATGATCGGCA CCATCACCGA CTGGGTACTG
GCCGAGGCCT GCAGACAGTT AGCCCACTGG CGTTCCATGG GGTTCAGCGA CCTGCGCATT
GCCGTGAACG TATCCCCCAA GGAGTTCGAA CGGGACGACA TGGTGGAGCA GCTCTCAAGA
TTCATGTCCA CCTTCCAACT TCCACCGGAC TCCCTGGAGG TGGAGATAAC GGAAAAGATC
CTCCTGCGCG ACACCCCCAG CGTCATCAAC AAGATGAAGA CCCTGCGCGA ACGGGGCATA
CGCATCTCCA TCGACGATTT CGGCACCTGC TATTCGTCAC TCAACTATCT GCGGCAGTTC
CCCATCAGCA CCATCAAGAT CGACCAGTCC TTTGTACGCG ACCTGTCGGA AGAACACCGC
ATCTCACCGA TCATACAGGC CATCATCGGC ATAGCCAATG GCTTCGGCCT GCACCTGCTG
GCAGAAGGCG TGGAGACGCA CTGCCAGATG CAGACCCTGC ATGCACTGGG CTGCAACGAG
ATGCAGGGCT ATCTGTTCAG CAGGCCGGCA CCAGCCGAAC AGATCGAGCA GATGCTGTGC
CACACGATCT CACACACCAC ATTGCAATCG CCGGACTTCC TCACCCATCC GCAACTGCTC
TCCCCTCTGC TCACTCAGGG CCTCCAGGAA CGCCCCCTGG CTTGA
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| Protein sequence | MNSLNTTTRA ALERHDRPHS ILIVDDEPRM RTSLRILLQE SGREILESKS GGEAIATLKT
KQIDLVLLDI ILPDISGLDV LEWITSRGDA LPASVIIVSV DDNIDSAIHA LRNGASEYIR
KPYEPEVIQH KVRNILYRRH LERDHVLITS RLQHSEQLHR FLVESSPDLI FTLDNSGCFT
FINSRIESLL GFSREELIGS CYDTIVLAED LKTAQHPFTE RRRGNRATTN LEIRLKCTPS
HYRNFENHHI VVMMSSTGIY GEHDNDFPLA RCFSGTYGVA RDITDRKIAE ETIAFQAFHD
HLTHLPNQRL FKDRLEMAIT HSKRHGGMVG VMFIDLDRFK IVNDTHGHAA GDELLKNVAH
RLRHCIRAVD TLARKGGDEF TVLLPDLMRA EDAALIAEKI MHELGIPFSV AGQKFHVSAS
IGIAIVPRDG ESIDTLLKSA DIAMYRVKAS GKNGYRFFTP DMNICYTKRI SLENELRQAI
PNSEFELFYQ PQVSINGASI IGLEALIRWR HPTHGLLNPG DFIELAEETG MIGTITDWVL
AEACRQLAHW RSMGFSDLRI AVNVSPKEFE RDDMVEQLSR FMSTFQLPPD SLEVEITEKI
LLRDTPSVIN KMKTLRERGI RISIDDFGTC YSSLNYLRQF PISTIKIDQS FVRDLSEEHR
ISPIIQAIIG IANGFGLHLL AEGVETHCQM QTLHALGCNE MQGYLFSRPA PAEQIEQMLC
HTISHTTLQS PDFLTHPQLL SPLLTQGLQE RPLA
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