| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0532 |
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| Symbol | |
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| ID | 3756516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 538642 |
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| End bp | 540789 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637781392 |
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| Product | response regulator receiver /GGDEF/PAS/PAC domain-containing protein |
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| Protein accession | YP_387028 |
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| Protein GI | 78355579 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCACG ATCCGCCCAG AGTTCTGTCG ATAGACGATG ATAGAAATGT CCGTGAAAAT
ATCGTCGCCT ATCTGGAAGA CAGCGGTTTT GATGTGGTCG AAGCCGAAAA CGGCCGTCAG
GGGCTGGAGG AGTTCGAAAG GTCCGCTCCG GACATCGTGC TTGTTGACCT GCGCATGCCG
GTGATGGACG GCATGCAGTT TCTGGCCGAG CTGCGCAAGA TTTCCAAACG CATTCCCGTT
ATTGTGGTTT CCGGCGTGGG TGTGCTTGAA GAAGCTGTGG AGGCTTTGCG GCATGGCGCG
TGGGATTATG TAACCAAGCC CATCAGTGAC ATGGTGGTGC TGGAACACGC CGTGAACAAA
GCGCTGGAGC GCGCCCGCCT GCTGGATGAG CGCGACAGGT ACCGCGAGCG GCTGGAACAG
GAAGTGGCGG AACGTACCGG AGAGCTGCGC GAATCCAACG AGCGTCTGCT GGAGTTTCAG
AGTCTGCTGC AGGAAAAAAA CCAGTTTCTG GAAGCGCTTA TCGAAAGCAT GCCCAACCCT
GTGTTTTTCA AGTCGCTGGA AGGTGAATAT CTGGGCTGTA ATGCGGCGTT CTGCCGCATA
CTGGGCAAAC CCAAAGAGGA CATTGTGGGG CGCAGGGCAG AAGACCTGCT GCCCGAAGAA
GTGGCCTGCC GTGTGCTGGA AGGAGGTGTG CTGTCCGGTG CTCAGGAACG CGCGCATTCG
TGCACCATCA CCATGCTGGG CGACGACGGC GGTCCGTTAC AGCTGGTGCT GTACAAGTCG
TTTTTTCAGA ACAGGGCGGG CGAAAACGCC GGTGTGGTGG GCACGTTCCA CGATATCACC
GAACTGAAGA AAAAAGAGGC CCAGATTTAC CATCAGGCCT ACCATGACGA GCTGACAGGG
CTGGCAAACC GTGTGCGCCT GAAAGATGCC ATAGCCGACC GCATACGGCT GGGCGGTGAC
GGTGGTCTGG CAGTGCTGAT GCTTGATCTG GATAATTTTA AAAACGTCAA CGACAGTCTG
GGGCACGGTG TGGGCGACAA GCTGCTGCTT GAGGCATCGC GCCGGCTGCG CGATGTTGTG
GGCCCGCAAC CGCTGCTGGC CAGAACCGGC GGCGACGAAT TCGCGCTGCT GCTCGACGGC
TGCAAGGACG TGGCAAACCG GCTTGCAGCC AAGGTGCTGG ATGCCTTCAC CGTTCCGTTT
GTCATTGATG AACACGAACT GTACATAACC ATCAGCATCG GGCTTACCTG CTGGCCGGAA
GACGGTGCCG ATGCCGATTC ACTGGTTAAA AACGCCGATG TGGCCATGTA CAAGGCCAAA
GAGCAGGGCC GCAGCCGCTG CCTGCATTTT GATGCCGAGA TGACCGAACA GGTCACCAGA
AGGCTGAGTA TTGAAAAGAG CATCCGCAAA GGGCTGGAAC GGGATGAGTT TCAGGTCTAC
TACCAGCCCA GAATCAATAT TTTTAACGGC AGACTGGTAG GCATGGAGGC GCTGGTGCGC
TGGGTGCCCG AACACGGTGC CGTGGTCAGC CCGGCGGAGT TTATTCCCGT TGCCGAAGAA
ACGGGGCTTA TTGTGGCGCT GGGCGAAAGG GTGCTGCGGC TGGCATGTGC CCAGATGCGT
ATATGGGCGG ACAGAGGGTG GGGTGACCTG CGTATGTCCG TCAATATTTC TGCCCGTCAG
TTTCAGGCCA ATCTGACGGA ACGTGTGGCC GCCGCACTGC GTGATTCCGG CATTTCTCCG
GATTCGCTGG AGCTTGAAAT CACGGAAACC ACCATGATGC GTGATATCGG GCAGACAGTG
CTGCTGCTTG AACAGCTGAA CGGCATGGGA CTGAAGATAG CCATCGACGA TTTTGGTACG
GGGCATTCCT CATTGTATTA TCTCAAGCGT TTCCCCATCA GCACGCTGAA GATAGATCGT
TCCTTCGTGC GCGATATCAT GAAGGACGAC GGCGATGCCA ACATTGTATC GACCATTATC
ACCATGGGGC ACAACCTGTC GCTGAATGTG GTGGCCGAAG GAGTGGAAAC GGACGAACAG
CTGGCTTTTC TGCGCGACAA GGGATGCGTT GAAGTGCAGG GCTTTTATTA CAGCAGGCCC
GTGCCGGCTG CGGAGTTTGA AGACTTCGTG CTGCGGCACC GGTCGTGA
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| Protein sequence | MQHDPPRVLS IDDDRNVREN IVAYLEDSGF DVVEAENGRQ GLEEFERSAP DIVLVDLRMP
VMDGMQFLAE LRKISKRIPV IVVSGVGVLE EAVEALRHGA WDYVTKPISD MVVLEHAVNK
ALERARLLDE RDRYRERLEQ EVAERTGELR ESNERLLEFQ SLLQEKNQFL EALIESMPNP
VFFKSLEGEY LGCNAAFCRI LGKPKEDIVG RRAEDLLPEE VACRVLEGGV LSGAQERAHS
CTITMLGDDG GPLQLVLYKS FFQNRAGENA GVVGTFHDIT ELKKKEAQIY HQAYHDELTG
LANRVRLKDA IADRIRLGGD GGLAVLMLDL DNFKNVNDSL GHGVGDKLLL EASRRLRDVV
GPQPLLARTG GDEFALLLDG CKDVANRLAA KVLDAFTVPF VIDEHELYIT ISIGLTCWPE
DGADADSLVK NADVAMYKAK EQGRSRCLHF DAEMTEQVTR RLSIEKSIRK GLERDEFQVY
YQPRINIFNG RLVGMEALVR WVPEHGAVVS PAEFIPVAEE TGLIVALGER VLRLACAQMR
IWADRGWGDL RMSVNISARQ FQANLTERVA AALRDSGISP DSLELEITET TMMRDIGQTV
LLLEQLNGMG LKIAIDDFGT GHSSLYYLKR FPISTLKIDR SFVRDIMKDD GDANIVSTII
TMGHNLSLNV VAEGVETDEQ LAFLRDKGCV EVQGFYYSRP VPAAEFEDFV LRHRS
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